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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102616932   pentatricopeptide repeat-containing protein At1g04840 
 ath-u.5   AT1G04840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100245116   pentatricopeptide repeat-containing protein At1g04840 
 ppo-u.5   7461658   pentatricopeptide repeat-containing protein At1g04840 
 sly-u.5   101246762   pentatricopeptide repeat-containing protein At1g04840 

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Top 50 coexpressed genes to 102616932 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102616932 (cit-r.1 coexpression data)

CoexMap"102616932"


citLOC102616932 | Entrez gene ID : 102616932    
Species cit ath vvi ppo sly hvu zma bna bra ghi osa mtr sbi bdi nta gma tae cre sot
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006489825.2 [sequence] [blastp]
XP_006489826.2 [sequence] [blastp]
XP_024958234.2 [sequence] [blastp]
XP_024958235.2 [sequence] [blastp]
XP_024958236.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_006489825.2)
chlo 6,  mito 4  (predict for XP_006489826.2)
chlo 7,  mito 3  (predict for XP_024958234.2)
chlo 8,  mito 2  (predict for XP_024958235.2)
chlo 8,  mito 2  (predict for XP_024958236.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006489825.2)
chlo 5  (predict for XP_006489826.2)
chlo 5  (predict for XP_024958234.2)
chlo 5  (predict for XP_024958235.2)
chlo 5  (predict for XP_024958236.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102616932
ath-u.5
for
AT1G04840
vvi-u.5
for
100245116
ppo-u.5
for
7461658
sly-u.5
for
101246762


Ortholog ID: 14061
Species cit ath ghi ghi vvi ppo sly sot nta nta
Symbol LOC102616932 AT1G04840 LOC107936089 LOC107934426 LOC100245116 LOC7461658 LOC101246762 LOC102584565 LOC107786336 LOC107800995
Function* pentatricopeptide repeat-containing protein At1g04840 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840-like pentatricopeptide repeat-containing protein At1g04840-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102616932 839402 107936089 107934426 100245116 7461658 101246762 102584565 107786336 107800995
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