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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107800995  pentatricopeptide repeat-containing protein At1g04840-like 
 nta-r.1  107786336  pentatricopeptide repeat-containing protein At1g04840-like 
 sly-u.5  101246762  pentatricopeptide repeat-containing protein At1g04840 
 sot-r.1  102584565  pentatricopeptide repeat-containing protein At1g04840 
 ath-u.5  AT1G04840  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100245116  pentatricopeptide repeat-containing protein At1g04840 
 ppo-u.5  7461658  pentatricopeptide repeat-containing protein At1g04840 
 ghi-r.1  107934426  pentatricopeptide repeat-containing protein At1g04840 
 ghi-r.1  107936089  pentatricopeptide repeat-containing protein At1g04840 
 cit-r.1  102616932  pentatricopeptide repeat-containing protein At1g04840 

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Top 50 coexpressed genes to 107800995 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107800995 (nta-r.1 coexpression data)

CoexMap"107800995"


ntaLOC107800995 | Entrez gene ID : 107800995
Species nta sly sot ath vvi ppo ghi cit bdi osa tae bna zma cre mtr sbi gma bra hvu
Paralog 2 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016479905.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  nucl 2,  mito 2,  plas 2,  chlo_mito 2,  nucl_plas 2,  mito_plas 2  (predict for XP_016479905.2)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016479905.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107800995


nta-r.1
for
107786336


sly-u.5
for
101246762


sot-r.1
for
102584565


ath-u.5
for
AT1G04840


vvi-u.5
for
100245116


ppo-u.5
for
7461658


ghi-r.1
for
107934426


ghi-r.1
for
107936089


cit-r.1
for
102616932



Ortholog ID: 14061
Species nta nta sly sot ath vvi ppo ghi ghi cit
Symbol LOC107800995 LOC107786336 LOC101246762 LOC102584565 AT1G04840 LOC100245116 LOC7461658 LOC107934426 LOC107936089 LOC102616932
Function* pentatricopeptide repeat-containing protein At1g04840-like pentatricopeptide repeat-containing protein At1g04840-like pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107800995 107786336 101246762 102584565 839402 100245116 7461658 107934426 107936089 102616932
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