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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107786336   pentatricopeptide repeat-containing protein At1g04840-like 
 sly-u.5   101246762   pentatricopeptide repeat-containing protein At1g04840 
 ath-u.5   AT1G04840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100245116   pentatricopeptide repeat-containing protein At1g04840 
 ppo-u.5   7461658   pentatricopeptide repeat-containing protein At1g04840 

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Top 50 coexpressed genes to 107786336 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107786336 (nta-r.1 coexpression data)

CoexMap"107786336"


ntaLOC107786336 | Entrez gene ID : 107786336      
Species nta sly ath vvi ppo bdi mtr bra hvu cit gma bna sbi ghi osa sot cre tae zma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016463289.1 [sequence] [blastp]
XP_075113033.1 [sequence] [blastp]
XP_075113034.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  E.R. 3  (predict for XP_016463289.1)
plas 7,  E.R. 3  (predict for XP_075113033.1)
plas 7,  E.R. 3  (predict for XP_075113034.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016463289.1)
chlo 5  (predict for XP_075113033.1)
chlo 5  (predict for XP_075113034.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107786336
sly-u.5
for
101246762
ath-u.5
for
AT1G04840
vvi-u.5
for
100245116
ppo-u.5
for
7461658


Ortholog ID: 14061
Species nta nta sly sot ath vvi ppo ghi ghi cit
Symbol LOC107786336 LOC107800995 LOC101246762 LOC102584565 AT1G04840 LOC100245116 LOC7461658 LOC107936089 LOC107934426 LOC102616932
Function* pentatricopeptide repeat-containing protein At1g04840-like pentatricopeptide repeat-containing protein At1g04840-like pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840 pentatricopeptide repeat-containing protein At1g04840
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107786336 107800995 101246762 102584565 839402 100245116 7461658 107936089 107934426 102616932
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