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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620389   uncharacterized LOC102620389 
 ath-u.5   AT3G18860   transducin family protein / WD-40 repeat family protein 
 bra-r.6   103869516   phospholipase A-2-activating protein 
 bra-r.6   103859777   phospholipase A-2-activating protein 
 ghi-r.1   107945161   phospholipase A-2-activating protein 
 ghi-r.1   107898757   phospholipase A-2-activating protein 
 bna-r.1   106451923   phospholipase A-2-activating protein 
 bna-r.1   125605179   phospholipase A-2-activating protein-like 
 bna-r.1   106446847   phospholipase A-2-activating protein 
 gma-u.5   100816481   phospholipase A-2-activating protein 
 gma-u.5   100805404   phospholipase A-2-activating protein 
 vvi-u.5   100243593   uncharacterized LOC100243593 
 ppo-u.5   112326107   uncharacterized LOC112326107 
 ppo-u.5   7469977   uncharacterized LOC7469977 
 ppo-u.5   7457495   uncharacterized LOC7457495 
 mtr-u.5   25492716   phospholipase A-2-activating protein 
 sly-u.5   101264260   uncharacterized LOC101264260 
 sot-r.1   102594856   phospholipase A-2-activating protein 
 nta-r.1   107765477   uncharacterized LOC107765477 
 nta-r.1   107760255   uncharacterized LOC107760255 
 osa-u.5   4342300   uncharacterized LOC4342300 
 zma-u.5   100382771   transducin family protein / WD-40 repeat family protein 
 tae-r.2   123045064   phospholipase A-2-activating protein 
 tae-r.2   123052907   phospholipase A-2-activating protein 
 tae-r.2   123188895   phospholipase A-2-activating protein 
 hvu-r.1   123426307   phospholipase A-2-activating protein 
 sbi-r.1   8059893   phospholipase A-2-activating protein 
 bdi-r.1   100844705   phospholipase A-2-activating protein 
 cre-r.1   CHLRE_09g389912v5   uncharacterized protein 

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Top 50 coexpressed genes to 102620389 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620389 (cit-r.1 coexpression data)

CoexMap"102620389"


citLOC102620389 | Entrez gene ID : 102620389    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 3 2 1 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04141 [list] [network] Protein processing in endoplasmic reticulum (189 genes)
GO BP
GO:0010992 [list] [network] ubiquitin recycling  (1 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (119 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (49 genes)  IEA  
Protein XP_006487197.2 [sequence] [blastp]
XP_015388405.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_nucl 4,  nucl 2,  chlo 2,  cysk 1,  golg 1  (predict for XP_006487197.2)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  cysk 1  (predict for XP_015388405.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006487197.2)
other 9  (predict for XP_015388405.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620389
ath-u.5
for
AT3G18860
bra-r.6
for
103869516
bra-r.6
for
103859777
ghi-r.1
for
107945161
ghi-r.1
for
107898757
bna-r.1
for
106451923
bna-r.1
for
125605179
bna-r.1
for
106446847
gma-u.5
for
100816481
gma-u.5
for
100805404
vvi-u.5
for
100243593
ppo-u.5
for
112326107
ppo-u.5
for
7469977
ppo-u.5
for
7457495
mtr-u.5
for
25492716
sly-u.5
for
101264260
sot-r.1
for
102594856
nta-r.1
for
107765477
nta-r.1
for
107760255
osa-u.5
for
4342300
zma-u.5
for
100382771
tae-r.2
for
123045064
tae-r.2
for
123052907
tae-r.2
for
123188895
hvu-r.1
for
123426307
sbi-r.1
for
8059893
bdi-r.1
for
100844705
cre-r.1
for
CHLRE_09g389912v5


Ortholog ID: 7220
Species cit ath bra bra ghi ghi bna bna bna gma gma vvi ppo ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102620389 AT3G18860 LOC103869516 LOC103859777 LOC107945161 LOC107898757 LOC125605179 LOC106439535 LOC106378069 LOC100816481 LOC100805404 LOC100243593 LOC112326107 LOC7469977 LOC7457495 LOC25492716 LOC101264260 LOC102594856 LOC107765477 LOC107760255 LOC4342300 LOC100382771 LOC123045064 LOC123052907 LOC123188895 LOC123426307 LOC8059893 LOC100844705 CHLRE_09g389912v5
Function* uncharacterized LOC102620389 transducin family protein / WD-40 repeat family protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein-like phospholipase A-2-activating protein phospholipase A-2-activating protein-like phospholipase A-2-activating protein phospholipase A-2-activating protein uncharacterized LOC100243593 uncharacterized LOC112326107 uncharacterized LOC7469977 uncharacterized LOC7457495 phospholipase A-2-activating protein uncharacterized LOC101264260 phospholipase A-2-activating protein uncharacterized LOC107765477 uncharacterized LOC107760255 uncharacterized LOC4342300 transducin family protein / WD-40 repeat family protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 14
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 3
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03083 Polycomb repressive complex 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 3
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04141 Protein processing in endoplasmic reticulum 3
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma04141 Protein processing in endoplasmic reticulum 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03040 Spliceosome 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03083 Polycomb repressive complex 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 4
tae04141 Protein processing in endoplasmic reticulum 4
tae04070 Phosphatidylinositol signaling system 3
tae03018 RNA degradation 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03083 Polycomb repressive complex 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03050 Proteasome 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04144 Endocytosis 3
sbi03013 Nucleocytoplasmic transport 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620389 821419 103869516 103859777 107945161 107898757 125605179 106439535 106378069 100816481 100805404 100243593 112326107 7469977 7457495 25492716 101264260 102594856 107765477 107760255 4342300 100382771 123045064 123052907 123188895 123426307 8059893 100844705 5720623
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