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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102627750   E3 ubiquitin-protein ligase UPL1 
 ath-u.5   UPL1   LOW protein: E3 ubiquitin ligase-like protein 
 ath-u.5   UPL2   ubiquitin-protein ligase 2 
 bra-r.6   103871016   E3 ubiquitin-protein ligase UPL1 
 ghi-r.1   107952986   E3 ubiquitin-protein ligase UPL1 
 ghi-r.1   107921765   E3 ubiquitin-protein ligase UPL1 
 bna-r.1   125610053   E3 ubiquitin-protein ligase UPL1-like 
 gma-u.5   100819012   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100801545   E3 ubiquitin-protein ligase UPL1 
 vvi-u.5   100246297   E3 ubiquitin-protein ligase UPL1 
 ppo-u.5   18103282   E3 ubiquitin-protein ligase UPL1 
 ppo-u.5   18095379   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25493428   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25493427   E3 ubiquitin-protein ligase UPL1 
 sly-u.5   101249744   E3 ubiquitin-protein ligase UPL1 
 sot-r.1   102593233   E3 ubiquitin-protein ligase UPL1-like 
 nta-r.1   107803669   E3 ubiquitin-protein ligase UPL1 
 nta-r.1   107791675   E3 ubiquitin-protein ligase UPL1-like 
 osa-u.5   4346522   E3 ubiquitin-protein ligase UPL1 
 zma-u.5   100304346   E3 ubiquitin-protein ligase UPL1 
 sbi-r.1   110432934   E3 ubiquitin-protein ligase UPL1-like 

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Top 50 coexpressed genes to 102627750 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102627750 (cit-r.1 coexpression data)

CoexMap"102627750"


citLOC102627750 | Entrez gene ID : 102627750    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma sbi bdi cre tae hvu
Paralog 1 2 1 2 1 2 1 2 2 1 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit04120 [list] [network] Ubiquitin mediated proteolysis (122 genes)
GO BP
GO:0045732 [list] [network] positive regulation of protein catabolic process  (39 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (64 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (119 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (249 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006474873.1 [sequence] [blastp]
XP_006474874.1 [sequence] [blastp]
XP_006474875.1 [sequence] [blastp]
XP_006474876.1 [sequence] [blastp]
XP_015384664.1 [sequence] [blastp]
XP_024953553.1 [sequence] [blastp]
XP_024953554.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_006474873.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_006474874.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_006474875.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_006474876.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_015384664.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_024953553.1)
chlo 5,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1  (predict for XP_024953554.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_006474873.1)
mito 5,  other 3  (predict for XP_006474874.1)
mito 5,  other 3  (predict for XP_006474875.1)
mito 5,  other 3  (predict for XP_006474876.1)
mito 5,  other 3  (predict for XP_015384664.1)
mito 5,  other 3  (predict for XP_024953553.1)
mito 5,  other 3  (predict for XP_024953554.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102627750
ath-u.5
for
UPL1
ath-u.5
for
UPL2
bra-r.6
for
103871016
ghi-r.1
for
107952986
ghi-r.1
for
107921765
bna-r.1
for
125610053
gma-u.5
for
100819012
gma-u.5
for
100801545
vvi-u.5
for
100246297
ppo-u.5
for
18103282
ppo-u.5
for
18095379
mtr-u.5
for
25493428
mtr-u.5
for
25493427
sly-u.5
for
101249744
sot-r.1
for
102593233
nta-r.1
for
107803669
nta-r.1
for
107791675
osa-u.5
for
4346522
zma-u.5
for
100304346
sbi-r.1
for
110432934


Ortholog ID: 12043
Species cit ath ath bra ghi ghi bna gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma sbi
Symbol LOC102627750 UPL1 UPL2 LOC103871016 LOC107952986 LOC107921765 LOC125610053 LOC100819012 LOC100801545 LOC100246297 LOC18103282 LOC18095379 LOC25493428 LOC25493427 LOC101249744 LOC102593233 LOC107803669 LOC107791675 LOC4346522 LOC100304346 LOC110432934
Function* E3 ubiquitin-protein ligase UPL1 LOW protein: E3 ubiquitin ligase-like protein ubiquitin-protein ligase 2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627750 842036 843368 103871016 107952986 107921765 125610053 100819012 100801545 100246297 18103282 18095379 25493428 25493427 101249744 102593233 107803669 107791675 4346522 100304346 110432934
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