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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110432934   E3 ubiquitin-protein ligase UPL1-like 
 zma-u.5   100304346   E3 ubiquitin-protein ligase UPL1 
 osa-u.5   4346522   E3 ubiquitin-protein ligase UPL1 
 ath-u.5   UPL1   LOW protein: E3 ubiquitin ligase-like protein 
 ath-u.5   UPL2   ubiquitin-protein ligase 2 
 gma-u.5   100819012   E3 ubiquitin-protein ligase UPL1 
 gma-u.5   100801545   E3 ubiquitin-protein ligase UPL1 
 sly-u.5   101249744   E3 ubiquitin-protein ligase UPL1 
 bra-r.6   103871016   E3 ubiquitin-protein ligase UPL1 
 vvi-u.5   100246297   E3 ubiquitin-protein ligase UPL1 
 ppo-u.5   18095379   E3 ubiquitin-protein ligase UPL1 
 ppo-u.5   18103282   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25493428   E3 ubiquitin-protein ligase UPL1 
 mtr-u.5   25493427   E3 ubiquitin-protein ligase UPL1 
 ghi-r.1   107952986   E3 ubiquitin-protein ligase UPL1 
 ghi-r.1   107921765   E3 ubiquitin-protein ligase UPL1 
 bna-r.1   125610053   E3 ubiquitin-protein ligase UPL1-like 
 sot-r.1   102593233   E3 ubiquitin-protein ligase UPL1-like 
 cit-r.1   102627750   E3 ubiquitin-protein ligase UPL1 
 nta-r.1   107791675   E3 ubiquitin-protein ligase UPL1-like 
 nta-r.1   107803669   E3 ubiquitin-protein ligase UPL1 

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Top 50 coexpressed genes to 110432934 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110432934 (sbi-r.1 coexpression data)

CoexMap"110432934"


sbiLOC110432934 | Entrez gene ID : 110432934    
Species sbi zma osa ath gma sly bra vvi ppo mtr ghi bna sot cit nta bdi cre tae hvu
Paralog 1 1 1 2 2 1 1 1 2 2 2 1 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04120 [list] [network] Ubiquitin mediated proteolysis (153 genes)
GO BP
GO:0045732 [list] [network] positive regulation of protein catabolic process  (36 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (65 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (133 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021309873.1 [sequence] [blastp]
XP_021309874.1 [sequence] [blastp]
XP_021309875.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  cyto_nucl 2,  cyto 1,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_021309873.1)
nucl 3,  chlo 2,  cyto_nucl 2,  cyto 1,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_021309874.1)
chlo 3,  nucl 3,  cyto 1,  cysk_nucl 1,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_021309875.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_021309873.1)
mito 4,  other 3  (predict for XP_021309874.1)
mito 4,  other 3  (predict for XP_021309875.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110432934
zma-u.5
for
100304346
osa-u.5
for
4346522
ath-u.5
for
UPL1
ath-u.5
for
UPL2
gma-u.5
for
100819012
gma-u.5
for
100801545
sly-u.5
for
101249744
bra-r.6
for
103871016
vvi-u.5
for
100246297
ppo-u.5
for
18095379
ppo-u.5
for
18103282
mtr-u.5
for
25493428
mtr-u.5
for
25493427
ghi-r.1
for
107952986
ghi-r.1
for
107921765
bna-r.1
for
125610053
sot-r.1
for
102593233
cit-r.1
for
102627750
nta-r.1
for
107791675
nta-r.1
for
107803669


Ortholog ID: 12043
Species sbi zma osa ath ath gma gma sly bra vvi ppo ppo mtr mtr ghi ghi bna sot cit nta nta
Symbol LOC110432934 LOC100304346 LOC4346522 UPL1 UPL2 LOC100819012 LOC100801545 LOC101249744 LOC103871016 LOC100246297 LOC18095379 LOC18103282 LOC25493428 LOC25493427 LOC107952986 LOC107921765 LOC125610053 LOC102593233 LOC102627750 LOC107791675 LOC107803669
Function* E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 LOW protein: E3 ubiquitin ligase-like protein ubiquitin-protein ligase 2 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1 E3 ubiquitin-protein ligase UPL1-like E3 ubiquitin-protein ligase UPL1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03082 ATP-dependent chromatin remodeling 3
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110432934 100304346 4346522 842036 843368 100819012 100801545 101249744 103871016 100246297 18095379 18103282 25493428 25493427 107952986 107921765 125610053 102593233 102627750 107791675 107803669
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