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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102629798  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 ath-u.5  DOT4  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100810760  pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 gma-u.5  100789088  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 vvi-u.5  100242930  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 mtr-u.5  11412407  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 osa-u.5  4327084  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 zma-u.5  103642486  pentatricopeptide repeat-containing protein DOT4, chloroplastic 

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Top 50 coexpressed genes to 102629798 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102629798 (cit-r.1 coexpression data)

CoexMap"102629798"


citLOC102629798 | Entrez gene ID : 102629798
Species cit ath gma vvi mtr osa zma hvu bna sly bra ghi ppo sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006467621.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  cyto 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_006467621.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_006467621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102629798


ath-u.5
for
DOT4


gma-u.5
for
100810760


gma-u.5
for
100789088


vvi-u.5
for
100242930


mtr-u.5
for
11412407


osa-u.5
for
4327084


zma-u.5
for
103642486



Ortholog ID: 12215
Species cit ath bra ghi ghi bna bna gma gma vvi mtr osa zma tae hvu sbi bdi
Symbol LOC102629798 DOT4 LOC103856774 LOC107909648 LOC107925311 LOC106431800 LOC106404075 LOC100810760 LOC100789088 LOC100242930 LOC11412407 LOC4327084 LOC103642486 LOC123077677 LOC123443088 LOC8062429 LOC100845277
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102629798 827609 103856774 107909648 107925311 106431800 106404075 100810760 100789088 100242930 11412407 4327084 103642486 123077677 123443088 8062429 100845277
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