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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123443088  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 osa-u.5  4327084  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 zma-u.5  103642486  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 ath-u.5  DOT4  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100810760  pentatricopeptide repeat-containing protein DOT4, chloroplastic-like 
 gma-u.5  100789088  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 vvi-u.5  100242930  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 mtr-u.5  11412407  pentatricopeptide repeat-containing protein DOT4, chloroplastic 

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Top 50 coexpressed genes to 123443088 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123443088 (hvu-r.1 coexpression data)

CoexMap"123443088"


hvuLOC123443088 | Entrez gene ID : 123443088
Species hvu osa zma ath gma vvi mtr bna sly cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044975272.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cysk 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_044975272.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044975272.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123443088


osa-u.5
for
4327084


zma-u.5
for
103642486


ath-u.5
for
DOT4


gma-u.5
for
100810760


gma-u.5
for
100789088


vvi-u.5
for
100242930


mtr-u.5
for
11412407



Ortholog ID: 12215
Species hvu tae bdi osa zma sbi ath gma gma bra vvi mtr ghi ghi bna bna cit
Symbol LOC123443088 LOC123077677 LOC100845277 LOC4327084 LOC103642486 LOC8062429 DOT4 LOC100810760 LOC100789088 LOC103856774 LOC100242930 LOC11412407 LOC107909648 LOC107925311 LOC106431800 LOC106404075 LOC102629798
Function* pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein DOT4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123443088 123077677 100845277 4327084 103642486 8062429 827609 100810760 100789088 103856774 100242930 11412407 107909648 107925311 106431800 106404075 102629798
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