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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   102666460   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 gma-r.7   102666460   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 mtr-u.5   11408008   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ppo-u.5   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ath-u.5   AT2G27800   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G27300   pentatricopeptide (PPR) repeat-containing protein 
 bra-r.6   103829686   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 vvi-u.5   100255250   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ghi-r.1   107949062   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ghi-r.1   121203257   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 bna-r.1   106352561   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 bna-r.1   106391156   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 cit-r.1   102616531   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 sly-u.5   101255987   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 sot-r.1   102605218   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 nta-r.1   107783418   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 nta-r.1   107777387   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 osa-u.5   4325543   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 zma-u.5   100383988   uncharacterized LOC100383988 
 tae-r.2   123070620   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 tae-r.2   123079023   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 hvu-r.1   123444396   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 sbi-r.1   8062183   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 bdi-r.1   100821598   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 

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Top 50 coexpressed genes to 102666460 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102666460 (gma-u.5 coexpression data)

CoexMap"102666460"


gmaLOC102666460 | Entrez gene ID : 102666460      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 2 2 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0140053 [list] [network] mitochondrial gene expression  (73 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014620039.1 [sequence] [blastp]
XP_014620040.1 [sequence] [blastp]
XP_014620041.1 [sequence] [blastp]
XP_040863356.1 [sequence] [blastp]
XP_040863357.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  chlo 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_014620039.1)
chlo 6,  nucl 2,  plas 1  (predict for XP_014620040.1)
chlo 7,  plas 1,  nucl 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_014620041.1)
chlo 7,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040863356.1)
chlo 6,  plas 1,  nucl 1,  mito 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_040863357.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_014620039.1)
mito 7  (predict for XP_014620040.1)
mito 7  (predict for XP_014620041.1)
mito 7  (predict for XP_040863356.1)
mito 7  (predict for XP_040863357.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
102666460
gma-r.7
for
102666460
mtr-u.5
for
11408008
ppo-u.5
for
7488977
ath-u.5
for
AT2G27800
ath-u.5
for
AT5G27300
bra-r.6
for
103829686
vvi-u.5
for
100255250
ghi-r.1
for
107949062
ghi-r.1
for
121203257
bna-r.1
for
106352561
bna-r.1
for
106391156
cit-r.1
for
102616531
sly-u.5
for
101255987
sot-r.1
for
102605218
nta-r.1
for
107783418
nta-r.1
for
107777387
osa-u.5
for
4325543
zma-u.5
for
100383988
tae-r.2
for
123070620
tae-r.2
for
123079023
hvu-r.1
for
123444396
sbi-r.1
for
8062183
bdi-r.1
for
100821598


Ortholog ID: 10011
Species gma mtr ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102666460 LOC11408008 LOC7488977 AT2G27800 AT5G27300 LOC103829686 LOC100255250 LOC107949062 LOC121203257 LOC106352561 LOC106391156 LOC102616531 LOC101255987 LOC102605218 LOC107783418 LOC107777387 LOC4325543 LOC100383988 LOC123070620 LOC123079023 LOC123444396 LOC8062183 LOC100821598
Function* pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial uncharacterized LOC100383988 pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102666460 11408008 7488977 817327 832788 103829686 100255250 107949062 121203257 106352561 106391156 102616531 101255987 102605218 107783418 107777387 4325543 100383988 123070620 123079023 123444396 8062183 100821598
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