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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107777387   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 sly-u.5   101255987   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 ath-u.5   AT2G27800   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G27300   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   102666460   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 vvi-u.5   100255250   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ppo-u.5   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 mtr-u.5   11408008   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 osa-u.5   4325543   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 zma-u.5   100383988   uncharacterized LOC100383988 

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Top 50 coexpressed genes to 107777387 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107777387 (nta-r.1 coexpression data)

CoexMap"107777387"


ntaLOC107777387 | Entrez gene ID : 107777387      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016452882.1 [sequence] [blastp]
XP_016452895.1 [sequence] [blastp]
XP_016452898.1 [sequence] [blastp]
XP_016452904.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016452882.1)
cyto 3,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for XP_016452895.1)
cyto 3,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for XP_016452898.1)
cyto 3,  chlo 2,  nucl 2,  mito 2,  chlo_mito 2  (predict for XP_016452904.1)
Subcellular
localization
TargetP
other 3  (predict for XP_016452882.1)
mito 5,  chlo 3  (predict for XP_016452895.1)
mito 5,  chlo 3  (predict for XP_016452898.1)
mito 5,  chlo 3  (predict for XP_016452904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107777387
sly-u.5
for
101255987
ath-u.5
for
AT2G27800
ath-u.5
for
AT5G27300
gma-u.5
for
102666460
vvi-u.5
for
100255250
ppo-u.5
for
7488977
mtr-u.5
for
11408008
osa-u.5
for
4325543
zma-u.5
for
100383988


Ortholog ID: 10011
Species nta nta sly sot ath ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107777387 LOC107783418 LOC101255987 LOC102605218 AT5G27300 AT2G27800 LOC102666460 LOC103829686 LOC100255250 LOC7488977 LOC11408008 LOC107949062 LOC121203257 LOC106391156 LOC106352561 LOC102616531 LOC4325543 LOC100383988 LOC123079023 LOC123070620 LOC123444396 LOC8062183 LOC100821598
Function* pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial uncharacterized LOC100383988 pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107777387 107783418 101255987 102605218 832788 817327 102666460 103829686 100255250 7488977 11408008 107949062 121203257 106391156 106352561 102616531 4325543 100383988 123079023 123070620 123444396 8062183 100821598
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