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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123444396   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 tae-r.2   123070620   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 tae-r.2   123079023   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 bdi-r.1   100821598   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 osa-u.5   4325543   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 zma-u.5   100383988   uncharacterized LOC100383988 
 sbi-r.1   8062183   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ath-u.5   AT2G27800   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G27300   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   102666460   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 sly-u.5   101255987   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 bra-r.6   103829686   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 vvi-u.5   100255250   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ppo-u.5   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 mtr-u.5   11408008   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ghi-r.1   107949062   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ghi-r.1   121203257   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 bna-r.1   106391156   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 bna-r.1   106352561   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 sot-r.1   102605218   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 cit-r.1   102616531   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 nta-r.1   107783418   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 nta-r.1   107777387   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 

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Top 50 coexpressed genes to 123444396 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123444396 (hvu-r.1 coexpression data)

CoexMap"123444396"


hvuLOC123444396 | Entrez gene ID : 123444396    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 2 1 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044977030.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_044977030.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_044977030.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123444396
tae-r.2
for
123070620
tae-r.2
for
123079023
bdi-r.1
for
100821598
osa-u.5
for
4325543
zma-u.5
for
100383988
sbi-r.1
for
8062183
ath-u.5
for
AT2G27800
ath-u.5
for
AT5G27300
gma-u.5
for
102666460
sly-u.5
for
101255987
bra-r.6
for
103829686
vvi-u.5
for
100255250
ppo-u.5
for
7488977
mtr-u.5
for
11408008
ghi-r.1
for
107949062
ghi-r.1
for
121203257
bna-r.1
for
106391156
bna-r.1
for
106352561
sot-r.1
for
102605218
cit-r.1
for
102616531
nta-r.1
for
107783418
nta-r.1
for
107777387


Ortholog ID: 10011
Species hvu tae tae bdi osa zma sbi ath ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123444396 LOC123070620 LOC123079023 LOC100821598 LOC4325543 LOC100383988 LOC8062183 AT2G27800 AT5G27300 LOC102666460 LOC101255987 LOC103829686 LOC100255250 LOC7488977 LOC11408008 LOC107949062 LOC121203257 LOC106391156 LOC106352561 LOC102605218 LOC102616531 LOC107783418 LOC107777387
Function* pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial uncharacterized LOC100383988 pentatricopeptide repeat-containing protein At2g27800, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123444396 123070620 123079023 100821598 4325543 100383988 8062183 817327 832788 102666460 101255987 103829686 100255250 7488977 11408008 107949062 121203257 106391156 106352561 102605218 102616531 107783418 107777387
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