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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ppo-r.4   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ppo-m.4   7488977   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 gma-u.5   102666460   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 mtr-u.5   11408008   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 ath-u.5   AT2G27800   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-u.5   AT5G27300   pentatricopeptide (PPR) repeat-containing protein 
 vvi-u.5   100255250   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 sly-u.5   101255987   pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like 
 osa-u.5   4325543   pentatricopeptide repeat-containing protein At2g27800, mitochondrial 
 zma-u.5   100383988   uncharacterized LOC100383988 

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Top 50 coexpressed genes to 7488977 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488977 (ppo-u.5 coexpression data)

CoexMap"7488977"


ppoLOC7488977 | Entrez gene ID : 7488977    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024445671.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_024445671.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024445671.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7488977

.
ppo-r.4
for
7488977

.
ppo-m.4
for
7488977

.
gma-u.5
for
102666460

.
mtr-u.5
for
11408008

.
ath-u.5
for
AT2G27800

.
ath-u.5
for
AT5G27300

.
vvi-u.5
for
100255250

.
sly-u.5
for
101255987

.
osa-u.5
for
4325543

.
zma-u.5
for
100383988

.


Ortholog ID: 10011
Species ath ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G27300 AT2G27800 LOC102666460 LOC101255987 LOC4325543 LOC100383988 LOC103829686 LOC100255250 LOC7488977 LOC11408008 LOC123079023 LOC123070620 LOC123444396 LOC107949062 LOC121203257 LOC106391156 LOC106352561 LOC8062183 LOC102605218 LOC102616531 LOC100821598 LOC107777387 LOC107783418
Function* pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial uncharacterized LOC100383988 pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial pentatricopeptide repeat-containing protein At2g27800, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832788 817327 102666460 101255987 4325543 100383988 103829686 100255250 7488977 11408008 123079023 123070620 123444396 107949062 121203257 106391156 106352561 8062183 102605218 102616531 100821598 107777387 107783418
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