ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103627942	uncharacterized protein DDB_G0284459
zma-r.6	103627942	uncharacterized protein DDB_G0284459
zma-u.5	103644324	glutamic acid-rich protein
sbi-r.1	8060968	uncharacterized LOC8060968
sbi-r.1	8080156	myb-like protein X
osa-u.5	107278708	uncharacterized LOC107278708
osa-u.5	4334775	uncharacterized LOC4334775
tae-r.2	123164767	glutamic acid-rich protein
tae-r.2	123156600	TRAF3-interacting protein 1
tae-r.2	123114300	zinc finger CCCH domain-containing protein 18
hvu-r.1	123407805	uncharacterized protein DDB_G0284459
hvu-r.1	123395080	serine/arginine repetitive matrix protein 1-like
bdi-r.1	100822097	mediator of RNA polymerase II transcription subunit 1.1
bdi-r.1	100838614	zinc finger CCCH domain-containing protein 13
ath-u.5	AT5G48610	myb-like protein X
gma-u.5	100778584	myb-like protein X
gma-u.5	102668076	myb-like protein X
sly-u.5	101260029	uncharacterized LOC101260029
sly-u.5	101256675	uncharacterized LOC101256675
bra-r.6	103849388	glutamic acid-rich protein
bra-r.6	103859209	myb-like protein X
bra-r.6	103870683	DNA ligase 1
vvi-u.5	100250375	uncharacterized LOC100250375
vvi-u.5	100245554	uncharacterized LOC100245554
ppo-u.5	18107091	uncharacterized LOC18107091
ppo-u.5	7495842	uncharacterized LOC7495842
ppo-u.5	18107093	uncharacterized LOC18107093
mtr-u.5	112419799	myb-like protein X
mtr-u.5	11411351	DNA ligase 1
ghi-r.1	107934478	DEAD-box ATP-dependent RNA helicase 42
ghi-r.1	107914738	glutamic acid-rich protein
ghi-r.1	107915113	splicing regulatory glutamine/lysine-rich protein 1
bna-r.1	111206244	glutamic acid-rich protein-like
bna-r.1	106349001	TRAF3-interacting protein 1
bna-r.1	106348911	myb-like protein X
sot-r.1	102602389	transcription initiation factor TFIID subunit 3-like
sot-r.1	102581845	myb-like protein X
cit-r.1	102623498	uncharacterized LOC102623498
cit-r.1	102622758	uncharacterized LOC102622758
nta-r.1	107767395	uncharacterized LOC107767395
nta-r.1	107770135	uncharacterized LOC107770135
nta-r.1	107800463	uncharacterized LOC107800463

Top 50 coexpressed genes to 103627942 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103627942 (zma-u.5 coexpression data)

CoexMap"103627942"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_020393404.1 [sequence] [blastp]
XP_035814805.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 3	(predict for XP_020393404.1)
nucl 8, chlo 1	(predict for XP_035814805.1)

Subcellular
localization
TargetP

other 5, mito 5	(predict for XP_020393404.1)
other 5, mito 5	(predict for XP_035814805.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103627942	zma-r.6 for 103627942	zma-u.5 for 103644324	sbi-r.1 for 8060968	sbi-r.1 for 8080156	osa-u.5 for 107278708	osa-u.5 for 4334775	tae-r.2 for 123164767	tae-r.2 for 123156600	tae-r.2 for 123114300	hvu-r.1 for 123407805	hvu-r.1 for 123395080	bdi-r.1 for 100822097	bdi-r.1 for 100838614	ath-u.5 for AT5G48610	gma-u.5 for 100778584	gma-u.5 for 102668076	sly-u.5 for 101260029	sly-u.5 for 101256675	bra-r.6 for 103849388	bra-r.6 for 103859209	bra-r.6 for 103870683	vvi-u.5 for 100250375	vvi-u.5 for 100245554	ppo-u.5 for 18107091	ppo-u.5 for 7495842	ppo-u.5 for 18107093	mtr-u.5 for 112419799	mtr-u.5 for 11411351	ghi-r.1 for 107934478	ghi-r.1 for 107914738	ghi-r.1 for 107915113	bna-r.1 for 111206244	bna-r.1 for 106349001	bna-r.1 for 106348911	sot-r.1 for 102602389	sot-r.1 for 102581845	cit-r.1 for 102623498	cit-r.1 for 102622758	nta-r.1 for 107767395	nta-r.1 for 107770135	nta-r.1 for 107800463

Ortholog

Ortholog ID: 2508

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized protein DDB_G0284459

glutamic acid-rich protein

uncharacterized LOC8060968

myb-like protein X

uncharacterized LOC107278708

uncharacterized LOC4334775

zinc finger CCCH domain-containing protein 18

triadin

TRAF3-interacting protein 1

uncharacterized protein DDB_G0284459

serine/arginine repetitive matrix protein 1-like

mediator of RNA polymerase II transcription subunit 1.1

zinc finger CCCH domain-containing protein 13

myb-like protein X

uncharacterized LOC101260029

uncharacterized LOC101256675

glutamic acid-rich protein

myb-like protein X

TRAF3-interacting protein 1

uncharacterized LOC100250375

uncharacterized LOC100245554

uncharacterized LOC7495842

DEAD-box ATP-dependent RNA helicase 42

myb-like protein X

DNA ligase 1

DEAD-box ATP-dependent RNA helicase 42

myb-like protein X

glutamic acid-rich protein-like

TRAF3-interacting protein 1-like

myb-like protein X

transcription initiation factor TFIID subunit 3-like

myb-like protein X

uncharacterized LOC102623498

uncharacterized LOC102622758

uncharacterized LOC107770135

uncharacterized LOC107808026

uncharacterized LOC107808027

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	6
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3
mtr03040	Spliceosome	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

103627942

103644324

8060968

8080156

107278708

4334775

123114300

123087635

123151642

123407805

123395080

100822097

100838614

834918

100778584

102668076

101260029

101256675

103849388

103859209

103874971

100250375

100245554

7495842

7495841

112419799

11411351

107934478

107939143

107890498

111206244

125601819

106389014

102602389

102581845

102623498

102622758

107770135

107808026

107808027

The preparation time of this page was 0.3 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	3	2	2	1	2	2	3	2	3	2	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103627942 (zma-u.5 coexpression data)

Top 50 enrichment test to 103627942 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**