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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103630810   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 zma-r.6   103630810   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 sbi-r.1   8066537   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 osa-u.5   4339759   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 tae-r.2   123183313   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 tae-r.2   123148959   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 tae-r.2   123070039   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 hvu-r.1   123452201   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bdi-r.1   100821196   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 ath-u.5   SIGE   sigma factor E 
 gma-u.5   SIG5B   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like 
 gma-u.5   100811515   RNA polymerase sigma factor rpoD-like 
 gma-u.5   100796580   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 sly-u.5   101252660   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bra-r.6   103874286   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bra-r.6   103865831   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 vvi-u.5   100250120   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 ppo-u.5   18103620   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 ppo-u.5   18105512   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 mtr-u.5   11428191   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 ghi-r.1   107929486   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 ghi-r.1   107947260   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bna-r.1   106348281   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bna-r.1   106366017   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 bna-r.1   106411623   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like 
 sot-r.1   102586954   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 cit-r.1   102609535   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 nta-r.1   107795222   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 
 nta-r.1   107829846   RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like 

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Top 50 coexpressed genes to 103630810 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103630810 (zma-u.5 coexpression data)

CoexMap"103630810"


zmaLOC103630810 | Entrez gene ID : 103630810      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 3 1 2 1 2 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (96 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein XP_008650095.1 [sequence] [blastp]
XP_008650096.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for XP_008650095.1)
mito 5,  chlo_mito 5,  chlo 4  (predict for XP_008650096.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_008650095.1)
chlo 9,  mito 3  (predict for XP_008650096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103630810
zma-r.6
for
103630810
sbi-r.1
for
8066537
osa-u.5
for
4339759
tae-r.2
for
123183313
tae-r.2
for
123148959
tae-r.2
for
123070039
hvu-r.1
for
123452201
bdi-r.1
for
100821196
ath-u.5
for
SIGE
gma-u.5
for
SIG5B
gma-u.5
for
100811515
gma-u.5
for
100796580
sly-u.5
for
101252660
bra-r.6
for
103874286
bra-r.6
for
103865831
vvi-u.5
for
100250120
ppo-u.5
for
18103620
ppo-u.5
for
18105512
mtr-u.5
for
11428191
ghi-r.1
for
107929486
ghi-r.1
for
107947260
bna-r.1
for
106348281
bna-r.1
for
106366017
bna-r.1
for
106411623
sot-r.1
for
102586954
cit-r.1
for
102609535
nta-r.1
for
107795222
nta-r.1
for
107829846


Ortholog ID: 7735
Species zma sbi osa tae tae tae hvu bdi ath gma gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC103630810 LOC8066537 LOC4339759 LOC123183313 LOC123148959 LOC123070039 LOC123452201 LOC100821196 SIGE SIG5B LOC100796580 LOC100776369 LOC101252660 LOC103874286 LOC103865831 LOC100250120 LOC18103620 LOC18105512 LOC11428191 LOC107929486 LOC107947260 LOC106366017 LOC106411623 LOC106428449 LOC102586954 LOC102609535 LOC107795222 LOC107829846
Function* RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial sigma factor E RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
bna00900 Terpenoid backbone biosynthesis 2
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
bna00900 Terpenoid backbone biosynthesis 2
bna00561 Glycerolipid metabolism 2
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103630810 8066537 4339759 123183313 123148959 123070039 123452201 100821196 832477 100812580 100796580 100776369 101252660 103874286 103865831 100250120 18103620 18105512 11428191 107929486 107947260 106366017 106411623 106428449 102586954 102609535 107795222 107829846
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