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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103631592   protein RNA-directed DNA methylation 3 
 zma-r.6   103631592   protein RNA-directed DNA methylation 3 
 zma-m.5   103631592   protein RNA-directed DNA methylation 3 
 zma-u.5   103635834   Protein RNA-directed DNA methylation 3 
 sbi-r.1   8067483   protein RNA-directed DNA methylation 3 
 osa-u.5   9268124   protein RNA-directed DNA methylation 3 
 tae-r.2   123061843   protein RNA-directed DNA methylation 3 
 tae-r.2   123182551   protein RNA-directed DNA methylation 3 
 hvu-r.1   123446721   protein RNA-directed DNA methylation 3 
 bdi-r.1   100838678   protein RNA-directed DNA methylation 3 
 ath-u.5   KTF1   kow domain-containing transcription factor 1 
 gma-u.5   100818587   protein RNA-directed DNA methylation 3 
 gma-u.5   100787703   protein RNA-directed DNA methylation 3 
 gma-u.5   100777969   protein RNA-directed DNA methylation 3 
 sly-u.5   101254655   protein RNA-directed DNA methylation 3 
 bra-r.6   103847311   protein RNA-directed DNA methylation 3 
 vvi-u.5   100256388   protein RNA-directed DNA methylation 3 
 ppo-u.5   18102764   protein RNA-directed DNA methylation 3 
 ppo-u.5   7494923   protein RNA-directed DNA methylation 3 
 mtr-u.5   11433533   protein RNA-directed DNA methylation 3 
 mtr-u.5   25485545   protein RNA-directed DNA methylation 3 
 ghi-r.1   107939271   protein RNA-directed DNA methylation 3 
 ghi-r.1   107915791   protein RNA-directed DNA methylation 3 
 bna-r.1   106372532   protein RNA-directed DNA methylation 3-like 
 bna-r.1   125592304   protein RNA-directed DNA methylation 3-like 
 sot-r.1   102606156   protein RNA-directed DNA methylation 3 
 cit-r.1   102627386   protein RNA-directed DNA methylation 3 
 nta-r.1   107762737   uncharacterized LOC107762737 
 nta-r.1   107778095   uncharacterized LOC107778095 
 nta-r.1   107820160   protein RNA-directed DNA methylation 3 

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Top 50 coexpressed genes to 103631592 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103631592 (zma-u.5 coexpression data)

CoexMap"103631592"


zmaLOC103631592 | Entrez gene ID : 103631592    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 2 1 1 1 3 1 1 1 2 2 2 2 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (33 genes)  IEA  
GO:0032784 [list] [network] regulation of DNA-templated transcription elongation  (44 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (427 genes)  IEA  
GO CC
GO:0032044 [list] [network] DSIF complex  (7 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
Protein XP_020395199.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_020395199.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for XP_020395199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103631592
zma-r.6
for
103631592
zma-m.5
for
103631592
zma-u.5
for
103635834
sbi-r.1
for
8067483
osa-u.5
for
9268124
tae-r.2
for
123061843
tae-r.2
for
123182551
hvu-r.1
for
123446721
bdi-r.1
for
100838678
ath-u.5
for
KTF1
gma-u.5
for
100818587
gma-u.5
for
100787703
gma-u.5
for
100777969
sly-u.5
for
101254655
bra-r.6
for
103847311
vvi-u.5
for
100256388
ppo-u.5
for
18102764
ppo-u.5
for
7494923
mtr-u.5
for
11433533
mtr-u.5
for
25485545
ghi-r.1
for
107939271
ghi-r.1
for
107915791
bna-r.1
for
106372532
bna-r.1
for
125592304
sot-r.1
for
102606156
cit-r.1
for
102627386
nta-r.1
for
107762737
nta-r.1
for
107778095
nta-r.1
for
107820160


Ortholog ID: 8582
Species zma zma sbi osa tae tae hvu bdi ath gma gma gma sly bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta nta nta
Symbol LOC103631592 LOC103635834 LOC8067483 LOC9268124 LOC123061843 LOC123182551 LOC123446721 LOC100838678 KTF1 LOC100818587 LOC100787703 LOC100777969 LOC101254655 LOC103847311 LOC100256388 LOC18102764 LOC7494923 LOC11433533 LOC25485545 LOC107939271 LOC107915791 LOC106372532 LOC125592304 LOC102606156 LOC102627386 LOC107762737 LOC107778095 LOC107820160
Function* protein RNA-directed DNA methylation 3 Protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 kow domain-containing transcription factor 1 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3-like protein RNA-directed DNA methylation 3-like protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 uncharacterized LOC107762737 uncharacterized LOC107778095 protein RNA-directed DNA methylation 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 4
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103631592 103635834 8067483 9268124 123061843 123182551 123446721 100838678 830308 100818587 100787703 100777969 101254655 103847311 100256388 18102764 7494923 11433533 25485545 107939271 107915791 106372532 125592304 102606156 102627386 107762737 107778095 107820160
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