ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107939271	protein RNA-directed DNA methylation 3
ghi-r.1	107915791	protein RNA-directed DNA methylation 3
ath-u.5	KTF1	kow domain-containing transcription factor 1
bra-r.6	103847311	protein RNA-directed DNA methylation 3
bna-r.1	106372532	protein RNA-directed DNA methylation 3-like
bna-r.1	125592304	protein RNA-directed DNA methylation 3-like
cit-r.1	102627386	protein RNA-directed DNA methylation 3
gma-u.5	100818587	protein RNA-directed DNA methylation 3
gma-u.5	100787703	protein RNA-directed DNA methylation 3
gma-u.5	100777969	protein RNA-directed DNA methylation 3
vvi-u.5	100256388	protein RNA-directed DNA methylation 3
ppo-u.5	18102764	protein RNA-directed DNA methylation 3
ppo-u.5	7494923	protein RNA-directed DNA methylation 3
mtr-u.5	11433533	protein RNA-directed DNA methylation 3
mtr-u.5	25485545	protein RNA-directed DNA methylation 3
sly-u.5	101254655	protein RNA-directed DNA methylation 3
sot-r.1	102606156	protein RNA-directed DNA methylation 3
nta-r.1	107762737	uncharacterized LOC107762737
nta-r.1	107778095	uncharacterized LOC107778095
nta-r.1	107820160	protein RNA-directed DNA methylation 3
osa-u.5	9268124	protein RNA-directed DNA methylation 3
zma-u.5	103635834	Protein RNA-directed DNA methylation 3
zma-u.5	103631592	protein RNA-directed DNA methylation 3
tae-r.2	123061843	protein RNA-directed DNA methylation 3
tae-r.2	123182551	protein RNA-directed DNA methylation 3
hvu-r.1	123446721	protein RNA-directed DNA methylation 3
sbi-r.1	8067483	protein RNA-directed DNA methylation 3
bdi-r.1	100838678	protein RNA-directed DNA methylation 3

Annotation

functional annotation

KEGG

GO BP

GO:0006368 [list] [network] transcription elongation by RNA polymerase II	(65 genes)	IEA
GO:0032784 [list] [network] regulation of DNA-templated transcription elongation	(89 genes)	IEA
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II	(1121 genes)	IEA

GO CC

GO:0032044 [list] [network] DSIF complex

(12 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(890 genes)

IEA

Protein

XP_040933996.1 [sequence] [blastp]
XP_040933997.1 [sequence] [blastp]
XP_040933998.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_040933996.1)
nucl 9	(predict for XP_040933997.1)
nucl 9	(predict for XP_040933998.1)

Subcellular
localization
TargetP

other 8	(predict for XP_040933996.1)
other 8	(predict for XP_040933997.1)
other 8	(predict for XP_040933998.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107939271	ghi-r.1 for 107915791	ath-u.5 for KTF1	bra-r.6 for 103847311	bna-r.1 for 106372532	bna-r.1 for 125592304	cit-r.1 for 102627386	gma-u.5 for 100818587	gma-u.5 for 100787703	gma-u.5 for 100777969	vvi-u.5 for 100256388	ppo-u.5 for 18102764	ppo-u.5 for 7494923	mtr-u.5 for 11433533	mtr-u.5 for 25485545	sly-u.5 for 101254655	sot-r.1 for 102606156	nta-r.1 for 107762737	nta-r.1 for 107778095	nta-r.1 for 107820160	osa-u.5 for 9268124	zma-u.5 for 103635834	zma-u.5 for 103631592	tae-r.2 for 123061843	tae-r.2 for 123182551	hvu-r.1 for 123446721	sbi-r.1 for 8067483	bdi-r.1 for 100838678

Ortholog

Ortholog ID: 8582

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

KTF1

Function^*