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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777969   protein RNA-directed DNA methylation 3 
 gma-r.7   100777969   protein RNA-directed DNA methylation 3 
 gma-u.5   100818587   protein RNA-directed DNA methylation 3 
 gma-u.5   100787703   protein RNA-directed DNA methylation 3 
 mtr-u.5   25485545   protein RNA-directed DNA methylation 3 
 mtr-u.5   11433533   protein RNA-directed DNA methylation 3 
 ppo-u.5   7494923   protein RNA-directed DNA methylation 3 
 ppo-u.5   18102764   protein RNA-directed DNA methylation 3 
 ath-u.5   KTF1   kow domain-containing transcription factor 1 
 vvi-u.5   100256388   protein RNA-directed DNA methylation 3 
 sly-u.5   101254655   protein RNA-directed DNA methylation 3 
 osa-u.5   9268124   protein RNA-directed DNA methylation 3 
 zma-u.5   103635834   Protein RNA-directed DNA methylation 3 
 zma-u.5   103631592   protein RNA-directed DNA methylation 3 

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Top 50 coexpressed genes to 100777969 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777969 (gma-u.5 coexpression data)

CoexMap"100777969"


gmaLOC100777969 | Entrez gene ID : 100777969      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (35 genes)  IEA  
GO:0032784 [list] [network] regulation of DNA-templated transcription elongation  (67 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0032044 [list] [network] DSIF complex  (7 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_025983205.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_025983205.2)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for XP_025983205.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777969

.
gma-r.7
for
100777969

.
gma-u.5
for
100818587

.
gma-u.5
for
100787703

.
mtr-u.5
for
25485545

.
mtr-u.5
for
11433533

.
ppo-u.5
for
7494923

.
ppo-u.5
for
18102764

.
ath-u.5
for
KTF1

.
vvi-u.5
for
100256388

.
sly-u.5
for
101254655

.
osa-u.5
for
9268124

.
zma-u.5
for
103635834

.
zma-u.5
for
103631592

.


Ortholog ID: 8582
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol KTF1 LOC100818587 LOC100777969 LOC101254655 LOC9268124 LOC103635834 LOC103631592 LOC103847311 LOC100256388 LOC7494923 LOC18102764 LOC11433533 LOC25485545 LOC123061843 LOC123182551 LOC123446721 LOC107915791 LOC107939271 LOC106372532 LOC125592304 LOC8067483 LOC102606156 LOC102627386 LOC100838678 LOC107778095 LOC107762737
Function* kow domain-containing transcription factor 1 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 Protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3-like protein RNA-directed DNA methylation 3-like protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 protein RNA-directed DNA methylation 3 uncharacterized LOC107778095 uncharacterized LOC107762737
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03460 Fanconi anemia pathway 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 2
tae04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830308 100818587 100777969 101254655 9268124 103635834 103631592 103847311 100256388 7494923 18102764 11433533 25485545 123061843 123182551 123446721 107915791 107939271 106372532 125592304 8067483 102606156 102627386 100838678 107778095 107762737
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