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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103646322   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 zma-r.6   103646322   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 osa-u.5   4336149   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ath-u.5   AT5G09315   vacuolar sorting protein 9 domain protein 
 sly-u.5   101253840   pentatricopeptide repeat-containing protein At1g62350 
 vvi-u.5   100255649   pentatricopeptide repeat-containing protein At1g62350 
 ppo-u.5   7463355   protein THYLAKOID ASSEMBLY 8, chloroplastic 

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Top 50 coexpressed genes to 103646322 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103646322 (zma-u.5 coexpression data)

CoexMap"103646322"


zmaLOC103646322 | Entrez gene ID : 103646322    
Species zma osa ath sly vvi ppo hvu bna cit bra ghi mtr sbi bdi nta gma tae cre sot
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000373 [list] [network] Group II intron splicing  (7 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (67 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008669276.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for XP_008669276.2)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_008669276.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103646322
zma-r.6
for
103646322
osa-u.5
for
4336149
ath-u.5
for
AT5G09315
sly-u.5
for
101253840
vvi-u.5
for
100255649
ppo-u.5
for
7463355


Ortholog ID: 11829
Species zma sbi osa tae hvu bdi ath sly bra vvi ppo ghi ghi bna bna sot cit nta nta
Symbol LOC103646322 LOC8073575 LOC4336149 LOC123189515 LOC123430418 LOC100840687 AT5G09315 LOC101253840 LOC108870224 LOC100255649 LOC7463355 LOC107908976 LOC107940754 LOC125593178 LOC111201533 LOC102605053 LOC102612092 LOC107783783 LOC107832516
Function* protein THYLAKOID ASSEMBLY 8, chloroplastic pentatricopeptide repeat-containing protein At1g62350 protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like pentatricopeptide repeat-containing protein At1g62350 vacuolar sorting protein 9 domain protein pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 protein THYLAKOID ASSEMBLY 8, chloroplastic pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350-like pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350-like protein THYLAKOID ASSEMBLY 8, chloroplastic-like pentatricopeptide repeat-containing protein At1g62350-like pentatricopeptide repeat-containing protein At1g62350-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103646322 8073575 4336149 123189515 123430418 100840687 28721089 101253840 108870224 100255649 7463355 107908976 107940754 125593178 111201533 102605053 102612092 107783783 107832516
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