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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123430418   protein THYLAKOID ASSEMBLY 8, chloroplastic-like 
 bdi-r.1   100840687   pentatricopeptide repeat-containing protein At1g62350 
 osa-u.5   4336149   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 zma-u.5   103646322   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 sbi-r.1   8073575   pentatricopeptide repeat-containing protein At1g62350 
 ath-u.5   AT5G09315   vacuolar sorting protein 9 domain protein 
 sly-u.5   101253840   pentatricopeptide repeat-containing protein At1g62350 
 bra-r.6   108870224   pentatricopeptide repeat-containing protein At1g62350 
 vvi-u.5   100255649   pentatricopeptide repeat-containing protein At1g62350 
 ppo-u.5   7463355   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ghi-r.1   107908976   pentatricopeptide repeat-containing protein At1g62350 
 ghi-r.1   107940754   pentatricopeptide repeat-containing protein At1g62350 
 bna-r.1   111201533   pentatricopeptide repeat-containing protein At1g62350 
 bna-r.1   125593178   pentatricopeptide repeat-containing protein At1g62350-like 
 sot-r.1   102605053   pentatricopeptide repeat-containing protein At1g62350-like 
 cit-r.1   102612092   protein THYLAKOID ASSEMBLY 8, chloroplastic-like 
 nta-r.1   107832516   pentatricopeptide repeat-containing protein At1g62350-like 
 nta-r.1   107783783   pentatricopeptide repeat-containing protein At1g62350-like 

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Top 50 coexpressed genes to 123430418 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123430418 (hvu-r.1 coexpression data)

CoexMap"123430418"


hvuLOC123430418 | Entrez gene ID : 123430418    
Species hvu bdi osa zma sbi ath sly bra vvi ppo ghi bna sot cit nta gma cre mtr tae
Paralog 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000373 [list] [network] Group II intron splicing  (7 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (92 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044970223.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_044970223.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044970223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123430418
bdi-r.1
for
100840687
osa-u.5
for
4336149
zma-u.5
for
103646322
sbi-r.1
for
8073575
ath-u.5
for
AT5G09315
sly-u.5
for
101253840
bra-r.6
for
108870224
vvi-u.5
for
100255649
ppo-u.5
for
7463355
ghi-r.1
for
107908976
ghi-r.1
for
107940754
bna-r.1
for
111201533
bna-r.1
for
125593178
sot-r.1
for
102605053
cit-r.1
for
102612092
nta-r.1
for
107832516
nta-r.1
for
107783783


Ortholog ID: 11829
Species hvu tae bdi osa zma sbi ath sly bra vvi ppo ghi ghi bna bna sot cit nta nta
Symbol LOC123430418 LOC123189515 LOC100840687 LOC4336149 LOC103646322 LOC8073575 AT5G09315 LOC101253840 LOC108870224 LOC100255649 LOC7463355 LOC107908976 LOC107940754 LOC111201533 LOC125593178 LOC102605053 LOC102612092 LOC107832516 LOC107783783
Function* protein THYLAKOID ASSEMBLY 8, chloroplastic-like protein THYLAKOID ASSEMBLY 8, chloroplastic pentatricopeptide repeat-containing protein At1g62350 protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic pentatricopeptide repeat-containing protein At1g62350 vacuolar sorting protein 9 domain protein pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 protein THYLAKOID ASSEMBLY 8, chloroplastic pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350 pentatricopeptide repeat-containing protein At1g62350-like pentatricopeptide repeat-containing protein At1g62350-like protein THYLAKOID ASSEMBLY 8, chloroplastic-like pentatricopeptide repeat-containing protein At1g62350-like pentatricopeptide repeat-containing protein At1g62350-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123430418 123189515 100840687 4336149 103646322 8073575 28721089 101253840 108870224 100255649 7463355 107908976 107940754 111201533 125593178 102605053 102612092 107832516 107783783
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