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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103828504   pentatricopeptide repeat-containing protein At2g06000 
 bna-r.1   106357745   pentatricopeptide repeat-containing protein At2g06000 
 bna-r.1   106411480   pentatricopeptide repeat-containing protein At2g06000-like 
 ath-u.5   AT2G06000   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107907096   pentatricopeptide repeat-containing protein At2g06000 
 ghi-r.1   107893359   pentatricopeptide repeat-containing protein At2g06000 
 ghi-r.1   121202957   pentatricopeptide repeat-containing protein At2g06000 
 cit-r.1   102614332   pentatricopeptide repeat-containing protein At2g06000 
 gma-u.5   100816463   pentatricopeptide repeat-containing protein At2g06000 
 gma-u.5   100798448   pentatricopeptide repeat-containing protein At2g06000 
 gma-u.5   100788338   pentatricopeptide repeat-containing protein At2g06000 
 vvi-u.5   100252561   pentatricopeptide repeat-containing protein At2g06000 
 ppo-u.5   18100335   pentatricopeptide repeat-containing protein At2g06000 
 mtr-u.5   25491979   pentatricopeptide repeat-containing protein At2g06000 
 mtr-u.5   25486513   pentatricopeptide repeat-containing protein At2g06000 
 sly-u.5   101262963   pentatricopeptide repeat-containing protein At2g06000 
 sot-r.1   102597229   pentatricopeptide repeat-containing protein At2g06000 
 nta-r.1   107788832   uncharacterized LOC107788832 
 nta-r.1   107778825   uncharacterized LOC107778825 
 osa-u.5   4335965   pentatricopeptide repeat-containing protein At2g06000 
 zma-u.5   100383019   pentatricopeptide repeat-containing protein At2g06000 
 zma-u.5   103646391   pentatricopeptide repeat-containing protein 
 tae-r.2   123053421   pentatricopeptide repeat-containing protein At2g06000 
 tae-r.2   123189327   pentatricopeptide repeat-containing protein At2g06000 
 tae-r.2   123045585   pentatricopeptide repeat-containing protein At2g06000 
 hvu-r.1   123426835   pentatricopeptide repeat-containing protein At2g06000-like 
 sbi-r.1   8079389   pentatricopeptide repeat-containing protein At2g06000 
 bdi-r.1   100828567   pentatricopeptide repeat-containing protein At2g06000 

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Top 50 coexpressed genes to 103828504 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103828504 (bra-r.6 coexpression data)

CoexMap"103828504"


braLOC103828504 | Entrez gene ID : 103828504    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 3 1 3 1 1 2 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009102352.1 [sequence] [blastp]
XP_033131348.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009102352.1)
chlo 9  (predict for XP_033131348.1)
Subcellular
localization
TargetP
other 5  (predict for XP_009102352.1)
other 5  (predict for XP_033131348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103828504
bna-r.1
for
106357745
bna-r.1
for
106411480
ath-u.5
for
AT2G06000
ghi-r.1
for
107907096
ghi-r.1
for
107893359
ghi-r.1
for
121202957
cit-r.1
for
102614332
gma-u.5
for
100816463
gma-u.5
for
100798448
gma-u.5
for
100788338
vvi-u.5
for
100252561
ppo-u.5
for
18100335
mtr-u.5
for
25491979
mtr-u.5
for
25486513
sly-u.5
for
101262963
sot-r.1
for
102597229
nta-r.1
for
107788832
nta-r.1
for
107778825
osa-u.5
for
4335965
zma-u.5
for
100383019
zma-u.5
for
103646391
tae-r.2
for
123053421
tae-r.2
for
123189327
tae-r.2
for
123045585
hvu-r.1
for
123426835
sbi-r.1
for
8079389
bdi-r.1
for
100828567


Ortholog ID: 7502
Species bra bna bna ath ghi ghi ghi cit gma gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103828504 LOC106357745 LOC106411480 AT2G06000 LOC107907096 LOC121202957 LOC107958836 LOC102614332 LOC100816463 LOC100798448 LOC100788338 LOC100252561 LOC18100335 LOC25491979 LOC25486513 LOC101262963 LOC102597229 LOC107788832 LOC107778825 LOC4335965 LOC100383019 LOC103646391 LOC123053421 LOC123189327 LOC123045585 LOC123426835 LOC8079389 LOC100828567
Function* pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 uncharacterized LOC107788832 uncharacterized LOC107778825 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000-like pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03010 Ribosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103828504 106357745 106411480 815153 107907096 121202957 107958836 102614332 100816463 100798448 100788338 100252561 18100335 25491979 25486513 101262963 102597229 107788832 107778825 4335965 100383019 103646391 123053421 123189327 123045585 123426835 8079389 100828567
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