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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107893359   pentatricopeptide repeat-containing protein At2g06000 
 ath-u.5   AT2G06000   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100816463   pentatricopeptide repeat-containing protein At2g06000 
 gma-u.5   100798448   pentatricopeptide repeat-containing protein At2g06000 
 gma-u.5   100788338   pentatricopeptide repeat-containing protein At2g06000 
 vvi-u.5   100252561   pentatricopeptide repeat-containing protein At2g06000 
 ppo-u.5   18100335   pentatricopeptide repeat-containing protein At2g06000 
 mtr-u.5   25491979   pentatricopeptide repeat-containing protein At2g06000 
 mtr-u.5   25486513   pentatricopeptide repeat-containing protein At2g06000 
 sly-u.5   101262963   pentatricopeptide repeat-containing protein At2g06000 
 osa-u.5   4335965   pentatricopeptide repeat-containing protein At2g06000 
 zma-u.5   100383019   pentatricopeptide repeat-containing protein At2g06000 
 zma-u.5   103646391   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107893359 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107893359 (ghi-r.1 coexpression data)

CoexMap"107893359"


ghiLOC107893359 | Entrez gene ID : 107893359    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 3 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016673811.2 [sequence] [blastp]
XP_016673813.2 [sequence] [blastp]
XP_016673817.2 [sequence] [blastp]
XP_040941568.1 [sequence] [blastp]
XP_040941569.1 [sequence] [blastp]
XP_040941570.1 [sequence] [blastp]
XP_040941571.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_016673811.2)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_016673813.2)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_016673817.2)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_040941568.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_040941569.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_040941570.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_040941571.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016673811.2)
mito 7  (predict for XP_016673813.2)
mito 7  (predict for XP_016673817.2)
mito 7  (predict for XP_040941568.1)
mito 7  (predict for XP_040941569.1)
mito 7  (predict for XP_040941570.1)
mito 7  (predict for XP_040941571.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107893359
ath-u.5
for
AT2G06000
gma-u.5
for
100816463
gma-u.5
for
100798448
gma-u.5
for
100788338
vvi-u.5
for
100252561
ppo-u.5
for
18100335
mtr-u.5
for
25491979
mtr-u.5
for
25486513
sly-u.5
for
101262963
osa-u.5
for
4335965
zma-u.5
for
100383019
zma-u.5
for
103646391


Ortholog ID: 7502
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC121202957 LOC107907096 AT2G06000 LOC103828504 LOC106411480 LOC106357745 LOC102614332 LOC100816463 LOC100788338 LOC100252561 LOC18100335 LOC25491979 LOC25486513 LOC101262963 LOC102597229 LOC107778825 LOC107788832 LOC4335965 LOC100383019 LOC103646391 LOC123189327 LOC123053421 LOC123426835 LOC8079389 LOC100828567
Function* pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000-like pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 uncharacterized LOC107778825 uncharacterized LOC107788832 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000-like pentatricopeptide repeat-containing protein At2g06000 pentatricopeptide repeat-containing protein At2g06000
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03010 Ribosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121202957 107907096 815153 103828504 106411480 106357745 102614332 100816463 100788338 100252561 18100335 25491979 25486513 101262963 102597229 107778825 107788832 4335965 100383019 103646391 123189327 123053421 123426835 8079389 100828567
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