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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103829411   RING-H2 finger protein ATL80 
 bra-r.6   103874124   probable E3 ubiquitin-protein ligase ATL44 
 bra-r.6   103872868   RING-H2 finger protein ATL80 
 bna-r.1   106394440   probable E3 ubiquitin-protein ligase ATL44 
 bna-r.1   106361280   probable E3 ubiquitin-protein ligase ATL45 
 ath-u.5   RHA3A   RING-H2 finger A3A 
 ath-u.5   RHA3B   RING-H2 finger A3B 
 ath-u.5   AT1G20823   RING/U-box superfamily protein 
 ghi-r.1   107917879   RING-H2 finger protein ATL80 
 ghi-r.1   107922003   RING-H2 finger protein ATL80 
 cit-r.1   102610566   RING-H2 finger protein ATL80 
 gma-u.5   100786769   RING-H2 finger protein ATL8 
 gma-u.5   100787383   RING-H2 finger protein ATL8 
 gma-u.5   100789620   RING-H2 finger protein ATL8 
 vvi-u.5   100260977   RING-H2 finger protein ATL80 
 vvi-u.5   100266753   RING-H2 finger protein ATL8 
 ppo-u.5   7485656   RING-H2 finger protein ATL8 
 ppo-u.5   7471753   RING-H2 finger protein ATL8 
 mtr-u.5   11405802   RING-H2 finger protein ATL8 
 mtr-u.5   11411600   RING-H2 finger protein ATL80 
 mtr-u.5   11428288   RING-H2 finger protein ATL8 
 sly-u.5   101254466   RING-H2 finger protein ATL80 
 sly-u.5   101262287   RING-H2 finger protein ATL8 
 sly-u.5   101264584   RING-H2 finger protein ATL8-like 
 sot-r.1   102600767   RING-H2 finger protein ATL8-like 
 sot-r.1   102579592   RING-H2 finger protein ATL80 
 nta-r.1   107828572   RING-H2 finger protein ATL80 
 nta-r.1   107820728   RING-H2 finger protein ATL80-like 
 nta-r.1   107807258   RING-H2 finger protein ATL8 
 osa-u.5   9266473   RING-H2 finger protein ATL80 
 osa-u.5   4330352   RING-H2 finger protein ATL80 
 osa-u.5   4336787   probable E3 ubiquitin-protein ligase ATL44 
 zma-u.5   100284205   uncharacterized LOC100284205 
 zma-u.5   100283712   RING-H2 finger protein ATL1R 
 zma-u.5   100280990   RING-H2 finger protein ATL1R 
 tae-r.2   123130802   RING-H2 finger protein ATL8 
 tae-r.2   123134359   RING-H2 finger protein ATL8 
 tae-r.2   123141655   RING-H2 finger protein ATL8 
 hvu-r.1   123413267   probable E3 ubiquitin-protein ligase ATL44 
 hvu-r.1   123402337   RING-H2 finger protein ATL80-like 
 sbi-r.1   8066387   probable E3 ubiquitin-protein ligase ATL45 
 sbi-r.1   8060446   RING-H2 finger protein ATL74 
 sbi-r.1   8066454   probable E3 ubiquitin-protein ligase ATL44 
 bdi-r.1   100822098   probable E3 ubiquitin-protein ligase ATL44 
 bdi-r.1   100830458   RING-H2 finger protein ATL8 

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Top 50 coexpressed genes to 103829411 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103829411 (bra-r.6 coexpression data)

CoexMap"103830613"


braLOC103830613 | Entrez gene ID : 103830613    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 1 3 2 2 3 3 2 3 3 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (4843 genes)  IEA  
Protein XP_009104676.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009104676.1)
Subcellular
localization
TargetP
other 5  (predict for XP_009104676.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103829411
bra-r.6
for
103874124
bra-r.6
for
103872868
bna-r.1
for
106394440
bna-r.1
for
106361280
ath-u.5
for
RHA3A
ath-u.5
for
RHA3B
ath-u.5
for
AT1G20823
ghi-r.1
for
107917879
ghi-r.1
for
107922003
cit-r.1
for
102610566
gma-u.5
for
100786769
gma-u.5
for
100787383
gma-u.5
for
100789620
vvi-u.5
for
100260977
vvi-u.5
for
100266753
ppo-u.5
for
7485656
ppo-u.5
for
7471753
mtr-u.5
for
11405802
mtr-u.5
for
11411600
mtr-u.5
for
11428288
sly-u.5
for
101254466
sly-u.5
for
101262287
sly-u.5
for
101264584
sot-r.1
for
102600767
sot-r.1
for
102579592
nta-r.1
for
107828572
nta-r.1
for
107820728
nta-r.1
for
107807258
osa-u.5
for
9266473
osa-u.5
for
4330352
osa-u.5
for
4336787
zma-u.5
for
100284205
zma-u.5
for
100283712
zma-u.5
for
100280990
tae-r.2
for
123130802
tae-r.2
for
123134359
tae-r.2
for
123141655
hvu-r.1
for
123413267
hvu-r.1
for
123402337
sbi-r.1
for
8066387
sbi-r.1
for
8060446
sbi-r.1
for
8066454
bdi-r.1
for
100822098
bdi-r.1
for
100830458


Ortholog ID: 374
Species bra bra bra bna bna ath ath ath ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC103874124 LOC103845949 LOC103832100 LOC111210253 LOC106421305 RHA3A RHA3B AT1G20823 LOC107917879 LOC107922003 LOC102610566 LOC100786769 LOC100789620 LOC100813341 LOC100260977 LOC100266753 LOC7471753 LOC7492116 LOC11405802 LOC11411600 LOC11428288 LOC101254466 LOC101265820 LOC101248283 LOC102600767 LOC102579592 LOC107828572 LOC107807258 LOC107765274 LOC9266473 LOC4330352 LOC4336787 LOC100284205 LOC100283712 LOC103641925 LOC123141655 LOC123042069 LOC123451912 LOC123451909 LOC8066387 LOC8060446 LOC8066454 LOC100822098 LOC100829815
Function* probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80-like RING-H2 finger protein ATL80 RING-H2 finger A3A RING-H2 finger A3B RING/U-box superfamily protein RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8-like RING-H2 finger protein ATL8-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 probable E3 ubiquitin-protein ligase ATL44 uncharacterized LOC100284205 RING-H2 finger protein ATL1R RING-H2 finger protein ATL74 RING-H2 finger protein ATL8 RING-H2 finger protein ATL74 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL45 RING-H2 finger protein ATL74 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 4
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103874124 103845949 103832100 111210253 106421305 816251 829700 838674 107917879 107922003 102610566 100786769 100789620 100813341 100260977 100266753 7471753 7492116 11405802 11411600 11428288 101254466 101265820 101248283 102600767 102579592 107828572 107807258 107765274 9266473 4330352 4336787 100284205 100283712 103641925 123141655 123042069 123451912 123451909 8066387 8060446 8066454 100822098 100829815
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