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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103833810   mediator of RNA polymerase II transcription subunit 34 
 bna-r.1   106397225   ATP-dependent DNA helicase Q-like 2 
 bna-r.1   106416161   ATP-dependent DNA helicase Q-like 2 
 ath-u.5   RECQL2   RECQ helicase L2 
 ghi-r.1   107909120   ATP-dependent DNA helicase Q-like 2 
 ghi-r.1   107928239   ATP-dependent DNA helicase Q-like 2 
 cit-r.1   102630216   ATP-dependent DNA helicase Q-like 2 
 gma-u.5   100817635   ATP-dependent DNA helicase Q-like 2 
 vvi-u.5   100256266   ATP-dependent DNA helicase Q-like 2 
 ppo-u.5   7491914   ATP-dependent DNA helicase Q-like 2 
 mtr-u.5   11409950   ATP-dependent DNA helicase Q-like 2 
 sly-u.5   101268017   ATP-dependent DNA helicase Q-like 2 
 sot-r.1   102593600   mediator of RNA polymerase II transcription subunit 34-like 
 nta-r.1   107815379   ATP-dependent DNA helicase Q-like 2 
 nta-r.1   107814520   ATP-dependent DNA helicase Q-like 2 
 osa-u.5   4351234   ATP-dependent DNA helicase Q-like 2 
 zma-u.5   100382802   Mediator of RNA polymerase II transcription subunit 34 
 tae-r.2   123091731   ATP-dependent DNA helicase Q-like 2 
 tae-r.2   123086299   ATP-dependent DNA helicase Q-like 2 
 tae-r.2   123096715   ATP-dependent DNA helicase Q-like 2 
 hvu-r.1   123448118   ATP-dependent DNA helicase Q-like 2 
 sbi-r.1   8083623   mediator of RNA polymerase II transcription subunit 34 
 bdi-r.1   100837005   mediator of RNA polymerase II transcription subunit 34 
 cre-r.1   CHLRE_12g502350v5   uncharacterized protein 

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Top 50 coexpressed genes to 103833810 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103833810 (bra-r.6 coexpression data)

CoexMap"103833810"


braLOC103833810 | Entrez gene ID : 103833810    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (143 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (310 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (49 genes)  IEA  
GO:0005694 [list] [network] chromosome  (494 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (9 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (16 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (5846 genes)  IEA  
Protein XP_009108119.2 [sequence] [blastp]
XP_033132606.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 2,  vacu 1,  cyto_plas 1  (predict for XP_009108119.2)
nucl 5,  cyto 2,  vacu 1,  cyto_plas 1  (predict for XP_033132606.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009108119.2)
other 8  (predict for XP_033132606.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103833810
bna-r.1
for
106397225
bna-r.1
for
106416161
ath-u.5
for
RECQL2
ghi-r.1
for
107909120
ghi-r.1
for
107928239
cit-r.1
for
102630216
gma-u.5
for
100817635
vvi-u.5
for
100256266
ppo-u.5
for
7491914
mtr-u.5
for
11409950
sly-u.5
for
101268017
sot-r.1
for
102593600
nta-r.1
for
107815379
nta-r.1
for
107814520
osa-u.5
for
4351234
zma-u.5
for
100382802
tae-r.2
for
123091731
tae-r.2
for
123086299
tae-r.2
for
123096715
hvu-r.1
for
123448118
sbi-r.1
for
8083623
bdi-r.1
for
100837005
cre-r.1
for
CHLRE_12g502350v5


Ortholog ID: 10495
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103833810 LOC106397225 LOC106416161 RECQL2 LOC107909120 LOC107928239 LOC102630216 LOC100817635 LOC100256266 LOC7491914 LOC11409950 LOC101268017 LOC102593600 LOC107815379 LOC107814520 LOC4351234 LOC100382802 LOC123091731 LOC123086299 LOC123096715 LOC123448118 LOC8083623 LOC100837005 CHLRE_12g502350v5
Function* mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 RECQ helicase L2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34-like ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 Mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34 mediator of RNA polymerase II transcription subunit 34 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03015 mRNA surveillance pathway 2
nta00780 Biotin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103833810 106397225 106416161 840026 107909120 107928239 102630216 100817635 100256266 7491914 11409950 101268017 102593600 107815379 107814520 4351234 100382802 123091731 123086299 123096715 123448118 8083623 100837005 5716410
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