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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11409950   ATP-dependent DNA helicase Q-like 2 
 mtr-r.5   11409950   ATP-dependent DNA helicase Q-like 2 
 mtr-m.5   11409950   ATP-dependent DNA helicase Q-like 2 
 gma-u.5   100817635   ATP-dependent DNA helicase Q-like 2 
 ppo-u.5   7491914   ATP-dependent DNA helicase Q-like 2 
 ath-u.5   RECQL2   RECQ helicase L2 
 vvi-u.5   100256266   ATP-dependent DNA helicase Q-like 2 
 sly-u.5   101268017   ATP-dependent DNA helicase Q-like 2 
 osa-u.5   4351234   ATP-dependent DNA helicase Q-like 2 
 zma-u.5   100382802   Mediator of RNA polymerase II transcription subunit 34 

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Top 50 coexpressed genes to 11409950 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11409950 (mtr-u.5 coexpression data)

CoexMap"11409950"


mtrLOC11409950 | Entrez gene ID : 11409950      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (67 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (122 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO:0005694 [list] [network] chromosome  (402 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4514 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (9 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (16 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4267 genes)  IEA  
Protein XP_024640912.2 [sequence] [blastp]
XP_039690404.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_024640912.2)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_039690404.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024640912.2)
other 8  (predict for XP_039690404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11409950
mtr-r.5
for
11409950
mtr-m.5
for
11409950
gma-u.5
for
100817635
ppo-u.5
for
7491914
ath-u.5
for
RECQL2
vvi-u.5
for
100256266
sly-u.5
for
101268017
osa-u.5
for
4351234
zma-u.5
for
100382802


Ortholog ID: 10495
Species mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC11409950 LOC100817635 LOC7491914 RECQL2 LOC103833810 LOC100256266 LOC107909120 LOC107928239 LOC106416161 LOC106397225 LOC102630216 LOC101268017 LOC102593600 LOC107814520 LOC107815379 LOC4351234 LOC100382802 LOC123091731 LOC123096715 LOC123448118 LOC8083623 LOC100837005 CHLRE_12g502350v5
Function* ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 RECQ helicase L2 mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34-like ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 Mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34 mediator of RNA polymerase II transcription subunit 34 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03015 mRNA surveillance pathway 2
nta00780 Biotin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11409950 100817635 7491914 840026 103833810 100256266 107909120 107928239 106416161 106397225 102630216 101268017 102593600 107814520 107815379 4351234 100382802 123091731 123096715 123448118 8083623 100837005 5716410
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