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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123091731  ATP-dependent DNA helicase Q-like 2 
 tae-r.2  123086299  ATP-dependent DNA helicase Q-like 2 
 tae-r.2  123096715  ATP-dependent DNA helicase Q-like 2 
 hvu-r.1  123448118  ATP-dependent DNA helicase Q-like 2 
 bdi-r.1  100837005  mediator of RNA polymerase II transcription subunit 34 
 osa-u.5  4351234  ATP-dependent DNA helicase Q-like 2 
 zma-u.5  100382802  Mediator of RNA polymerase II transcription subunit 34 
 sbi-r.1  8083623  mediator of RNA polymerase II transcription subunit 34 
 ath-u.5  RECQL2  RECQ helicase L2 
 gma-u.5  100817635  ATP-dependent DNA helicase Q-like 2 
 sly-u.5  101268017  ATP-dependent DNA helicase Q-like 2 
 bra-r.6  103833810  mediator of RNA polymerase II transcription subunit 34 
 vvi-u.5  100256266  ATP-dependent DNA helicase Q-like 2 
 ppo-u.5  7491914  ATP-dependent DNA helicase Q-like 2 
 mtr-u.5  11409950  ATP-dependent DNA helicase Q-like 2 
 ghi-r.1  107928239  ATP-dependent DNA helicase Q-like 2 
 ghi-r.1  107909120  ATP-dependent DNA helicase Q-like 2 
 bna-r.1  106397225  ATP-dependent DNA helicase Q-like 2 
 bna-r.1  106416161  ATP-dependent DNA helicase Q-like 2 
 sot-r.1  102593600  mediator of RNA polymerase II transcription subunit 34-like 
 cit-r.1  102630216  ATP-dependent DNA helicase Q-like 2 
 nta-r.1  107814520  ATP-dependent DNA helicase Q-like 2 
 nta-r.1  107815379  ATP-dependent DNA helicase Q-like 2 
 cre-r.1  CHLRE_12g502350v5  uncharacterized protein 

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Top 50 coexpressed genes to 123091731 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123091731 (tae-r.2 coexpression data)

CoexMap"123091731"


taeLOC123091731 | Entrez gene ID : 123091731
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (222 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (358 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (119 genes)  IEA  
GO:0005694 [list] [network] chromosome  (1392 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0009378 [list] [network] four-way junction helicase activity  (23 genes)  IEA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (43 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (11810 genes)  IEA  
Protein XP_044369277.1 [sequence] [blastp]
XP_044369278.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  extr 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044369277.1)
nucl 7,  cyto 1,  extr 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044369278.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044369277.1)
other 8  (predict for XP_044369278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123091731


tae-r.2
for
123086299


tae-r.2
for
123096715


hvu-r.1
for
123448118


bdi-r.1
for
100837005


osa-u.5
for
4351234


zma-u.5
for
100382802


sbi-r.1
for
8083623


ath-u.5
for
RECQL2


gma-u.5
for
100817635


sly-u.5
for
101268017


bra-r.6
for
103833810


vvi-u.5
for
100256266


ppo-u.5
for
7491914


mtr-u.5
for
11409950


ghi-r.1
for
107928239


ghi-r.1
for
107909120


bna-r.1
for
106397225


bna-r.1
for
106416161


sot-r.1
for
102593600


cit-r.1
for
102630216


nta-r.1
for
107814520


nta-r.1
for
107815379


cre-r.1
for
CHLRE_12g502350v5



Ortholog ID: 10495
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123091731 LOC123086299 LOC123096715 LOC123448118 LOC100837005 LOC4351234 LOC100382802 LOC8083623 RECQL2 LOC100817635 LOC101268017 LOC103833810 LOC100256266 LOC7491914 LOC11409950 LOC107928239 LOC107909120 LOC106397225 LOC106416161 LOC102593600 LOC102630216 LOC107814520 LOC107815379 CHLRE_12g502350v5
Function* ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 Mediator of RNA polymerase II transcription subunit 34 mediator of RNA polymerase II transcription subunit 34 RECQ helicase L2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 mediator of RNA polymerase II transcription subunit 34-like ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 ATP-dependent DNA helicase Q-like 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
sly03013 Nucleocytoplasmic transport 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 3
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03015 mRNA surveillance pathway 2
nta00780 Biotin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123091731 123086299 123096715 123448118 100837005 4351234 100382802 8083623 840026 100817635 101268017 103833810 100256266 7491914 11409950 107928239 107909120 106397225 106416161 102593600 102630216 107814520 107815379 5716410
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