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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106352680   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 ath-u.5   AT5G39980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100784025   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 gma-u.5   100782934   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 vvi-u.5   100255941   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 ppo-u.5   7495943   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 mtr-u.5   11437358   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 sly-u.5   101262164   pentatricopeptide repeat-containing protein 
 osa-u.5   4327403   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 

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Top 50 coexpressed genes to 106352680 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106352680 (bna-r.1 coexpression data)

CoexMap"106352680"


bnaLOC106352680 | Entrez gene ID : 106352680    
Species bna ath gma vvi ppo mtr sly osa bdi hvu bra cit sbi ghi sot nta cre tae zma
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013647763.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013647763.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013647763.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106352680
ath-u.5
for
AT5G39980
gma-u.5
for
100784025
gma-u.5
for
100782934
vvi-u.5
for
100255941
ppo-u.5
for
7495943
mtr-u.5
for
11437358
sly-u.5
for
101262164
osa-u.5
for
4327403


Ortholog ID: 11747
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa tae hvu sbi bdi
Symbol LOC111212552 LOC106352680 LOC103850160 AT5G39980 LOC107958612 LOC107955542 LOC102615243 LOC100782934 LOC100784025 LOC100255941 LOC7495943 LOC11437358 LOC101262164 LOC102597895 LOC107816244 LOC107826375 LOC4327403 LOC123062494 LOC123444979 LOC8057752 LOC100828176
Function* pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g39980, chloroplastic uncharacterized LOC107816244 uncharacterized LOC107826375 pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00906 Carotenoid biosynthesis 3
tae00600 Sphingolipid metabolism 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111212552 106352680 103850160 833995 107958612 107955542 102615243 100782934 100784025 100255941 7495943 11437358 101262164 102597895 107816244 107826375 4327403 123062494 123444979 8057752 100828176
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