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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8057752   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 osa-u.5   4327403   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 ath-u.5   AT5G39980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100784025   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 gma-u.5   100782934   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 sly-u.5   101262164   pentatricopeptide repeat-containing protein 
 vvi-u.5   100255941   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 ppo-u.5   7495943   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 
 mtr-u.5   11437358   pentatricopeptide repeat-containing protein At5g39980, chloroplastic 

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Top 50 coexpressed genes to 8057752 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8057752 (sbi-r.1 coexpression data)

CoexMap"8057752"


sbiLOC8057752 | Entrez gene ID : 8057752      
Species sbi osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot zma tae bna ghi
Paralog 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002456587.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_002456587.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002456587.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8057752

.
osa-u.5
for
4327403

.
ath-u.5
for
AT5G39980

.
gma-u.5
for
100784025

.
gma-u.5
for
100782934

.
sly-u.5
for
101262164

.
vvi-u.5
for
100255941

.
ppo-u.5
for
7495943

.
mtr-u.5
for
11437358

.


Ortholog ID: 11747
Species ath gma gma sly osa bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G39980 LOC100782934 LOC100784025 LOC101262164 LOC4327403 LOC103850160 LOC100255941 LOC7495943 LOC11437358 LOC123062494 LOC123444979 LOC107958612 LOC107955542 LOC111212552 LOC106352680 LOC8057752 LOC102597895 LOC102615243 LOC100828176 LOC107816244 LOC107826375
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic pentatricopeptide repeat-containing protein At5g39980, chloroplastic uncharacterized LOC107816244 uncharacterized LOC107826375
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00906 Carotenoid biosynthesis 3
tae00600 Sphingolipid metabolism 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833995 100782934 100784025 101262164 4327403 103850160 100255941 7495943 11437358 123062494 123444979 107958612 107955542 111212552 106352680 8057752 102597895 102615243 100828176 107816244 107826375
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