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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G09060   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819721   pentatricopeptide repeat-containing protein At3g09060 
 vvi-u.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 ppo-u.5   7487453   pentatricopeptide repeat-containing protein At3g09060 
 mtr-u.5   25498726   pentatricopeptide repeat-containing protein At3g09060 
 sly-u.5   101243633   pentatricopeptide repeat-containing protein 
 osa-u.5   4324816   pentatricopeptide repeat-containing protein At3g09060 

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Top 50 coexpressed genes to AT3G09060 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G09060 (ath-u.5 coexpression data)

CoexMap"106352985"


bnaLOC106352985 | Entrez gene ID : 106352985    
Species ath gma vvi ppo mtr sly osa bdi hvu bra cit bna sbi ghi sot nta cre tae zma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013648096.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1,  E.R. 1,  cysk 1  (predict for XP_013648096.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_013648096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT3G09060
gma-u.5
for
100819721
vvi-u.5
for
100263920
ppo-u.5
for
7487453
mtr-u.5
for
25498726
sly-u.5
for
101243633
osa-u.5
for
4324816


Ortholog ID: 11672
Species bra ath ghi ghi gma vvi ppo mtr sly sot nta nta osa tae tae hvu sbi bdi
Symbol LOC103859312 AT3G09060 LOC107958038 LOC107905641 LOC100819721 LOC100263920 LOC7487453 LOC25498726 LOC101243633 LOC102578283 LOC107779460 LOC107768529 LOC4324816 LOC123062625 LOC123079781 LOC123444869 LOC8058922 LOC100830916
Function* pentatricopeptide repeat-containing protein At3g09060 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g09060 uncharacterized LOC107779460 uncharacterized LOC107768529 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103859312 820059 107958038 107905641 100819721 100263920 7487453 25498726 101243633 102578283 107779460 107768529 4324816 123062625 123079781 123444869 8058922 100830916
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