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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106387290   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   125576102   histidine--tRNA ligase, cytoplasmic-like 
 bna-r.1   106438950   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   125606966   histidine--tRNA ligase, cytoplasmic-like 
 bra-r.6   103843343   histidine--tRNA ligase, cytoplasmic 
 bra-r.6   103858979   histidine--tRNA ligase, cytoplasmic 
 ath-u.5   AT3G02760   Class II aaRS and biotin synthetases superfamily protein 
 ghi-r.1   107909090   histidine--tRNA ligase, cytoplasmic 
 ghi-r.1   107928358   histidine--tRNA ligase, cytoplasmic 
 cit-r.1   102629391   histidine--tRNA ligase, cytoplasmic 
 gma-u.5   100809535   histidine--tRNA ligase, cytoplasmic 
 gma-u.5   100777684   histidine--tRNA ligase, cytoplasmic 
 vvi-u.5   100241489   histidine--tRNA ligase, cytoplasmic 
 ppo-u.5   7455249   histidine--tRNA ligase, cytoplasmic 
 mtr-u.5   25483747   histidine--tRNA ligase, cytoplasmic 
 sly-u.5   101251038   histidine--tRNA ligase, cytoplasmic 
 sot-r.1   102589060   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107791338   histidine--tRNA ligase, cytoplasmic-like 
 nta-r.1   107823592   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107829876   histidine--tRNA ligase, cytoplasmic 
 osa-u.5   4337830   histidine--tRNA ligase, cytoplasmic-like 
 zma-u.5   100279212   uncharacterized LOC100279212 
 zma-u.5   103635898   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   100270649   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   542822   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   123191393   histidine--tRNA ligase, cytoplasmic 
 hvu-r.1   123425549   histidine--tRNA ligase, cytoplasmic 
 sbi-r.1   8075984   histidine--tRNA ligase, cytoplasmic 
 bdi-r.1   100820903   histidine--tRNA ligase, cytoplasmic 
 cre-r.1   CHLRE_02g142352v5   uncharacterized protein 

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Top 50 coexpressed genes to 106387290 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106387290 (bna-r.1 coexpression data)

CoexMap"106387290"


bnaLOC106387290 | Entrez gene ID : 106387290    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 2 1 1 1 1 1 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00970 [list] [network] Aminoacyl-tRNA biosynthesis (226 genes)
GO BP
GO:0006427 [list] [network] histidyl-tRNA aminoacylation  (7 genes)  IEA  
GO:0032543 [list] [network] mitochondrial translation  (64 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO MF
GO:0004821 [list] [network] histidine-tRNA ligase activity  (7 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013682575.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_013682575.2)
Subcellular
localization
TargetP
chlo 3,  mito 3  (predict for XP_013682575.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106387290
bna-r.1
for
125576102
bna-r.1
for
106438950
bna-r.1
for
125606966
bra-r.6
for
103843343
bra-r.6
for
103858979
ath-u.5
for
AT3G02760
ghi-r.1
for
107909090
ghi-r.1
for
107928358
cit-r.1
for
102629391
gma-u.5
for
100809535
gma-u.5
for
100777684
vvi-u.5
for
100241489
ppo-u.5
for
7455249
mtr-u.5
for
25483747
sly-u.5
for
101251038
sot-r.1
for
102589060
nta-r.1
for
107791338
nta-r.1
for
107823592
nta-r.1
for
107829876
osa-u.5
for
4337830
zma-u.5
for
100279212
zma-u.5
for
103635898
tae-r.2
for
100270649
tae-r.2
for
542822
tae-r.2
for
123191393
hvu-r.1
for
123425549
sbi-r.1
for
8075984
bdi-r.1
for
100820903
cre-r.1
for
CHLRE_02g142352v5


Ortholog ID: 7570
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106387290 LOC106438950 LOC125606966 LOC103843343 LOC103858979 AT3G02760 LOC107909090 LOC107928358 LOC102629391 LOC100809535 LOC100777684 LOC100241489 LOC7455249 LOC25483747 LOC101251038 LOC102589060 LOC107791338 LOC107823592 LOC107829876 LOC4337830 LOC100279212 LOC103635898 LOC100270649 LOC542822 LOC123191393 LOC123425549 LOC8075984 LOC100820903 CHLRE_02g142352v5
Function* histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic Class II aaRS and biotin synthetases superfamily protein histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like uncharacterized LOC100279212 histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot03018 RNA degradation 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre00260 Glycine, serine and threonine metabolism 2
cre00270 Cysteine and methionine metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387290 106438950 125606966 103843343 103858979 820930 107909090 107928358 102629391 100809535 100777684 100241489 7455249 25483747 101251038 102589060 107791338 107823592 107829876 4337830 100279212 103635898 100270649 542822 123191393 123425549 8075984 100820903 66052563
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