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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g142352v5   uncharacterized protein 
 ath-u.5   AT3G02760   Class II aaRS and biotin synthetases superfamily protein 
 gma-u.5   100777684   histidine--tRNA ligase, cytoplasmic 
 gma-u.5   100809535   histidine--tRNA ligase, cytoplasmic 
 sly-u.5   101251038   histidine--tRNA ligase, cytoplasmic 
 osa-u.5   4337830   histidine--tRNA ligase, cytoplasmic-like 
 zma-u.5   100279212   uncharacterized LOC100279212 
 zma-u.5   103635898   histidine--tRNA ligase, cytoplasmic 
 bra-r.6   103858979   histidine--tRNA ligase, cytoplasmic 
 bra-r.6   103843343   histidine--tRNA ligase, cytoplasmic 
 vvi-u.5   100241489   histidine--tRNA ligase, cytoplasmic 
 ppo-u.5   7455249   histidine--tRNA ligase, cytoplasmic 
 mtr-u.5   25483747   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   123191393   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   542822   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   100270649   histidine--tRNA ligase, cytoplasmic 
 hvu-r.1   123425549   histidine--tRNA ligase, cytoplasmic 
 ghi-r.1   107928358   histidine--tRNA ligase, cytoplasmic 
 ghi-r.1   107909090   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   125576102   histidine--tRNA ligase, cytoplasmic-like 
 bna-r.1   106438950   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   106387290   histidine--tRNA ligase, cytoplasmic 
 sbi-r.1   8075984   histidine--tRNA ligase, cytoplasmic 
 sot-r.1   102589060   histidine--tRNA ligase, cytoplasmic 
 cit-r.1   102629391   histidine--tRNA ligase, cytoplasmic 
 bdi-r.1   100820903   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107791338   histidine--tRNA ligase, cytoplasmic-like 
 nta-r.1   107823592   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107829876   histidine--tRNA ligase, cytoplasmic 

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Top 50 coexpressed genes to CHLRE_02g142352v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g142352v5 (cre-r.1 coexpression data)

CoexMap"66052563"


creCHLRE_02g142352v5 | Entrez gene ID : 66052563    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 2 1 1 1 3 1 2 3 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00970 [list] [network] Aminoacyl-tRNA biosynthesis (65 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (16 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (441 genes)  IEA  
GO MF
GO:0003824 [list] [network] catalytic activity  (4596 genes)  IEA  
Protein XP_042927807.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  vacu 2,  extr 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_042927807.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042927807.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g142352v5
ath-u.5
for
AT3G02760
gma-u.5
for
100777684
gma-u.5
for
100809535
sly-u.5
for
101251038
osa-u.5
for
4337830
zma-u.5
for
100279212
zma-u.5
for
103635898
bra-r.6
for
103858979
bra-r.6
for
103843343
vvi-u.5
for
100241489
ppo-u.5
for
7455249
mtr-u.5
for
25483747
tae-r.2
for
123191393
tae-r.2
for
542822
tae-r.2
for
100270649
hvu-r.1
for
123425549
ghi-r.1
for
107928358
ghi-r.1
for
107909090
bna-r.1
for
125576102
bna-r.1
for
106438950
bna-r.1
for
106387290
sbi-r.1
for
8075984
sot-r.1
for
102589060
cit-r.1
for
102629391
bdi-r.1
for
100820903
nta-r.1
for
107791338
nta-r.1
for
107823592
nta-r.1
for
107829876


Ortholog ID: 7570
Species cre ath gma gma sly osa zma zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_02g142352v5 AT3G02760 LOC100777684 LOC100809535 LOC101251038 LOC4337830 LOC100279212 LOC103635898 LOC103858979 LOC103843343 LOC100241489 LOC7455249 LOC25483747 LOC123191393 LOC542822 LOC100270649 LOC123425549 LOC107928358 LOC107909090 LOC106438950 LOC106387290 LOC125606966 LOC8075984 LOC102589060 LOC102629391 LOC100820903 LOC107791338 LOC107823592 LOC107829876
Function* uncharacterized protein Class II aaRS and biotin synthetases superfamily protein histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like uncharacterized LOC100279212 histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre00260 Glycine, serine and threonine metabolism 2
cre00270 Cysteine and methionine metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot03018 RNA degradation 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 66052563 820930 100777684 100809535 101251038 4337830 100279212 103635898 103858979 103843343 100241489 7455249 25483747 123191393 542822 100270649 123425549 107928358 107909090 106438950 106387290 125606966 8075984 102589060 102629391 100820903 107791338 107823592 107829876
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