Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123425549   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   100270649   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   542822   histidine--tRNA ligase, cytoplasmic 
 tae-r.2   123191393   histidine--tRNA ligase, cytoplasmic 
 bdi-r.1   100820903   histidine--tRNA ligase, cytoplasmic 
 osa-u.5   4337830   histidine--tRNA ligase, cytoplasmic-like 
 zma-u.5   100279212   uncharacterized LOC100279212 
 zma-u.5   103635898   histidine--tRNA ligase, cytoplasmic 
 sbi-r.1   8075984   histidine--tRNA ligase, cytoplasmic 
 ath-u.5   AT3G02760   Class II aaRS and biotin synthetases superfamily protein 
 gma-u.5   100809535   histidine--tRNA ligase, cytoplasmic 
 gma-u.5   100777684   histidine--tRNA ligase, cytoplasmic 
 sly-u.5   101251038   histidine--tRNA ligase, cytoplasmic 
 bra-r.6   103843343   histidine--tRNA ligase, cytoplasmic 
 bra-r.6   103858979   histidine--tRNA ligase, cytoplasmic 
 vvi-u.5   100241489   histidine--tRNA ligase, cytoplasmic 
 ppo-u.5   7455249   histidine--tRNA ligase, cytoplasmic 
 mtr-u.5   25483747   histidine--tRNA ligase, cytoplasmic 
 ghi-r.1   107928358   histidine--tRNA ligase, cytoplasmic 
 ghi-r.1   107909090   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   106438950   histidine--tRNA ligase, cytoplasmic 
 bna-r.1   125576102   histidine--tRNA ligase, cytoplasmic-like 
 bna-r.1   106387290   histidine--tRNA ligase, cytoplasmic 
 sot-r.1   102589060   histidine--tRNA ligase, cytoplasmic 
 cit-r.1   102629391   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107791338   histidine--tRNA ligase, cytoplasmic-like 
 nta-r.1   107823592   histidine--tRNA ligase, cytoplasmic 
 nta-r.1   107829876   histidine--tRNA ligase, cytoplasmic 
 cre-r.1   CHLRE_02g142352v5   uncharacterized protein 

close


Top 50 coexpressed genes to 123425549 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123425549 (hvu-r.1 coexpression data)

CoexMap"123425549"


hvuLOC123425549 | Entrez gene ID : 123425549    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 1 2 1 2 1 1 1 2 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00970 [list] [network] Aminoacyl-tRNA biosynthesis (92 genes)
GO BP
GO:0006427 [list] [network] histidyl-tRNA aminoacylation  (3 genes)  IEA  
GO:0032543 [list] [network] mitochondrial translation  (19 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (620 genes)  IEA  
GO MF
GO:0004821 [list] [network] histidine-tRNA ligase activity  (3 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
Protein XP_044965179.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  chlo 1,  vacu 1,  E.R. 1,  golg 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_044965179.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_044965179.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123425549
tae-r.2
for
100270649
tae-r.2
for
542822
tae-r.2
for
123191393
bdi-r.1
for
100820903
osa-u.5
for
4337830
zma-u.5
for
100279212
zma-u.5
for
103635898
sbi-r.1
for
8075984
ath-u.5
for
AT3G02760
gma-u.5
for
100809535
gma-u.5
for
100777684
sly-u.5
for
101251038
bra-r.6
for
103843343
bra-r.6
for
103858979
vvi-u.5
for
100241489
ppo-u.5
for
7455249
mtr-u.5
for
25483747
ghi-r.1
for
107928358
ghi-r.1
for
107909090
bna-r.1
for
106438950
bna-r.1
for
125576102
bna-r.1
for
106387290
sot-r.1
for
102589060
cit-r.1
for
102629391
nta-r.1
for
107791338
nta-r.1
for
107823592
nta-r.1
for
107829876
cre-r.1
for
CHLRE_02g142352v5


Ortholog ID: 7570
Species hvu tae tae tae bdi osa zma zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC123425549 LOC100270649 LOC542822 LOC123191393 LOC100820903 LOC4337830 LOC100279212 LOC103635898 LOC8075984 AT3G02760 LOC100809535 LOC100777684 LOC101251038 LOC103843343 LOC103858979 LOC100241489 LOC7455249 LOC25483747 LOC107928358 LOC107909090 LOC106438950 LOC106387290 LOC125606966 LOC102589060 LOC102629391 LOC107791338 LOC107823592 LOC107829876 CHLRE_02g142352v5
Function* histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like uncharacterized LOC100279212 histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic Class II aaRS and biotin synthetases superfamily protein histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic-like histidine--tRNA ligase, cytoplasmic histidine--tRNA ligase, cytoplasmic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot03018 RNA degradation 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre00260 Glycine, serine and threonine metabolism 2
cre00270 Cysteine and methionine metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123425549 100270649 542822 123191393 100820903 4337830 100279212 103635898 8075984 820930 100809535 100777684 101251038 103843343 103858979 100241489 7455249 25483747 107928358 107909090 106438950 106387290 125606966 102589060 102629391 107791338 107823592 107829876 66052563
The preparation time of this page was 0.1 [sec].