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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106401059   putative E3 ubiquitin-protein ligase RING1b 
 ath-u.5   RING1A   RING 1A 
 ath-u.5   RING1B   RING 1B 
 gma-u.5   100819311   putative E3 ubiquitin-protein ligase RING1a 
 gma-u.5   100801911   putative E3 ubiquitin-protein ligase RING1a 
 vvi-u.5   100267448   putative E3 ubiquitin-protein ligase RING1a 
 vvi-u.5   100267677   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   18106779   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   7459955   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   18103053   putative E3 ubiquitin-protein ligase RING1a 
 mtr-u.5   25493116   putative E3 ubiquitin-protein ligase RING1a 
 sly-u.5   101248496   putative E3 ubiquitin-protein ligase RING1a 
 sly-u.5   101258122   putative E3 ubiquitin-protein ligase RING1a 
 osa-u.5   9272357   putative E3 ubiquitin-protein ligase RING1a 
 osa-u.5   4327619   putative E3 ubiquitin-protein ligase RING1a 
 zma-u.5   100279610   putative RING zinc finger domain superfamily protein 
 zma-u.5   100383546   putative RING zinc finger domain superfamily protein 
 zma-u.5   100281596   Putative E3 ubiquitin-protein ligase RING1 

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Top 50 coexpressed genes to 106401059 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106401059 (bna-r.1 coexpression data)

CoexMap"106401059"


bnaLOC106401059 | Entrez gene ID : 106401059    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 2 3 1 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03083 [list] [network] Polycomb repressive complex (189 genes)
GO BP
GO CC
GO MF
Protein XP_013696944.1 [sequence] [blastp]
XP_022559169.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013696944.1)
chlo 7,  extr 1,  mito 1,  vacu 1  (predict for XP_022559169.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013696944.1)
scret 7  (predict for XP_022559169.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106401059

.
ath-u.5
for
RING1A

.
ath-u.5
for
RING1B

.
gma-u.5
for
100819311

.
gma-u.5
for
100801911

.
vvi-u.5
for
100267448

.
vvi-u.5
for
100267677

.
ppo-u.5
for
18106779

.
ppo-u.5
for
7459955

.
ppo-u.5
for
18103053

.
mtr-u.5
for
25493116

.
sly-u.5
for
101248496

.
sly-u.5
for
101258122

.
osa-u.5
for
9272357

.
osa-u.5
for
4327619

.
zma-u.5
for
100279610

.
zma-u.5
for
100383546

.
zma-u.5
for
100281596

.


Ortholog ID: 2297
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RING1A RING1B LOC100776547 LOC101258122 LOC101248496 LOC9272357 LOC4327619 LOC100279610 LOC100383546 LOC103839324 LOC103827915 LOC100267677 LOC100267448 LOC18103053 LOC7456782 LOC25487685 LOC25493116 LOC123079431 LOC123138311 LOC123444611 LOC123443642 LOC107934721 LOC107901798 LOC106401059 LOC106418239 CHLRE_04g213800v5 LOC8060463 LOC8065145 LOC102605523 LOC102581735 LOC102608198 LOC102616925 LOC100846593 LOC100833980 LOC107777823 LOC107798106
Function* RING 1A RING 1B putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1b putative E3 ubiquitin-protein ligase RING1a uncharacterized protein putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr01240 Biosynthesis of cofactors 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae04016 MAPK signaling pathway - plant 3
tae04626 Plant-pathogen interaction 3
tae03082 ATP-dependent chromatin remodeling 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
bdi03083 Polycomb repressive complex 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03013 Nucleocytoplasmic transport 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03013 Nucleocytoplasmic transport 2
nta00330 Arginine and proline metabolism 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834451 839413 100776547 101258122 101248496 9272357 4327619 100279610 100383546 103839324 103827915 100267677 100267448 18103053 7456782 25487685 25493116 123079431 123138311 123444611 123443642 107934721 107901798 106401059 106418239 5724229 8060463 8065145 102605523 102581735 102608198 102616925 100846593 100833980 107777823 107798106
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