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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18103053   putative E3 ubiquitin-protein ligase RING1a 
 ppo-r.4   18103053   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   7456782   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   18106779   putative E3 ubiquitin-protein ligase RING1a 
 ppo-u.5   7459955   putative E3 ubiquitin-protein ligase RING1a 
 gma-u.5   100776547   putative E3 ubiquitin-protein ligase RING1a 
 gma-u.5   100801738   putative E3 ubiquitin-protein ligase RING1a 
 gma-u.5   100801911   putative E3 ubiquitin-protein ligase RING1a 
 mtr-u.5   25493116   putative E3 ubiquitin-protein ligase RING1a 
 mtr-u.5   25487685   putative E3 ubiquitin-protein ligase RING1a 
 ath-u.5   RING1A   RING 1A 
 ath-u.5   RING1B   RING 1B 
 bra-r.6   103827915   putative E3 ubiquitin-protein ligase RING1a 
 bra-r.6   103839324   putative E3 ubiquitin-protein ligase RING1a 
 vvi-u.5   100267677   putative E3 ubiquitin-protein ligase RING1a 
 vvi-u.5   100267448   putative E3 ubiquitin-protein ligase RING1a 
 ghi-r.1   107901798   putative E3 ubiquitin-protein ligase RING1a 
 ghi-r.1   107961732   putative E3 ubiquitin-protein ligase RING1a 
 ghi-r.1   107946176   putative E3 ubiquitin-protein ligase RING1a 
 bna-r.1   106401059   putative E3 ubiquitin-protein ligase RING1b 
 bna-r.1   111200978   putative E3 ubiquitin-protein ligase RING1a 
 cit-r.1   102616925   putative E3 ubiquitin-protein ligase RING1a 
 cit-r.1   102608198   putative E3 ubiquitin-protein ligase RING1a 
 sly-u.5   101248496   putative E3 ubiquitin-protein ligase RING1a 
 sly-u.5   101258122   putative E3 ubiquitin-protein ligase RING1a 
 sot-r.1   102605523   putative E3 ubiquitin-protein ligase RING1a 
 sot-r.1   102581735   putative E3 ubiquitin-protein ligase RING1a 
 nta-r.1   107777823   putative E3 ubiquitin-protein ligase RING1a 
 nta-r.1   107792781   putative E3 ubiquitin-protein ligase RING1a 
 nta-r.1   107798106   putative E3 ubiquitin-protein ligase RING1a 
 osa-u.5   9272357   putative E3 ubiquitin-protein ligase RING1a 
 osa-u.5   4327619   putative E3 ubiquitin-protein ligase RING1a 
 zma-u.5   103645322   putative E3 ubiquitin-protein ligase RING1a 
 zma-u.5   100383546   putative RING zinc finger domain superfamily protein 
 zma-u.5   100281596   Putative E3 ubiquitin-protein ligase RING1 
 tae-r.2   123079431   putative E3 ubiquitin-protein ligase RING1a 
 tae-r.2   123062299   putative E3 ubiquitin-protein ligase RING1a 
 tae-r.2   123138311   putative E3 ubiquitin-protein ligase RING1a 
 hvu-r.1   123443642   putative E3 ubiquitin-protein ligase RING1a 
 hvu-r.1   123444611   putative E3 ubiquitin-protein ligase RING1a 
 sbi-r.1   8055240   putative E3 ubiquitin-protein ligase RING1a 
 sbi-r.1   8064193   putative E3 ubiquitin-protein ligase RING1a 
 sbi-r.1   8065145   putative E3 ubiquitin-protein ligase RING1a 
 bdi-r.1   100833980   putative E3 ubiquitin-protein ligase RING1a 
 bdi-r.1   100846593   putative E3 ubiquitin-protein ligase RING1a 
 cre-r.1   CHLRE_04g213800v5   uncharacterized protein 

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Top 50 coexpressed genes to 18103053 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18103053 (ppo-u.5 coexpression data)

CoexMap"18103053"


ppoLOC18103053 | Entrez gene ID : 18103053    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 2 2 3 2 2 2 2 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03083 [list] [network] Polycomb repressive complex (72 genes)
GO BP
GO CC
GO MF
Protein XP_006377392.3 [sequence] [blastp]
XP_024467599.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006377392.3)
nucl 10  (predict for XP_024467599.2)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_006377392.3)
other 8,  mito 3  (predict for XP_024467599.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18103053
ppo-r.4
for
18103053
ppo-u.5
for
7456782
ppo-u.5
for
18106779
ppo-u.5
for
7459955
gma-u.5
for
100776547
gma-u.5
for
100801738
gma-u.5
for
100801911
mtr-u.5
for
25493116
mtr-u.5
for
25487685
ath-u.5
for
RING1A
ath-u.5
for
RING1B
bra-r.6
for
103827915
bra-r.6
for
103839324
vvi-u.5
for
100267677
vvi-u.5
for
100267448
ghi-r.1
for
107901798
ghi-r.1
for
107961732
ghi-r.1
for
107946176
bna-r.1
for
106401059
bna-r.1
for
111200978
cit-r.1
for
102616925
cit-r.1
for
102608198
sly-u.5
for
101248496
sly-u.5
for
101258122
sot-r.1
for
102605523
sot-r.1
for
102581735
nta-r.1
for
107777823
nta-r.1
for
107792781
nta-r.1
for
107798106
osa-u.5
for
9272357
osa-u.5
for
4327619
zma-u.5
for
103645322
zma-u.5
for
100383546
zma-u.5
for
100281596
tae-r.2
for
123079431
tae-r.2
for
123062299
tae-r.2
for
123138311
hvu-r.1
for
123443642
hvu-r.1
for
123444611
sbi-r.1
for
8055240
sbi-r.1
for
8064193
sbi-r.1
for
8065145
bdi-r.1
for
100833980
bdi-r.1
for
100846593
cre-r.1
for
CHLRE_04g213800v5


Ortholog ID: 2297
Species ppo ppo ppo gma gma mtr mtr ath ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC18103053 LOC7456782 LOC7459955 LOC100776547 LOC100819311 LOC25493116 LOC25487685 RING1A RING1B LOC103827915 LOC103839324 LOC100267677 LOC100267448 LOC107901798 LOC107961732 LOC107934721 LOC106401059 LOC106411359 LOC106418239 LOC102616925 LOC102608198 LOC101248496 LOC101258122 LOC102605523 LOC102581735 LOC107777823 LOC107792781 LOC107798106 LOC9272357 LOC4327619 LOC103645322 LOC100383546 LOC100279610 LOC123079431 LOC123062299 LOC123138311 LOC123443642 LOC123444611 LOC8064193 LOC8065145 LOC8060463 LOC100833980 LOC100846593 CHLRE_04g213800v5
Function* putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a RING 1A RING 1B putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1b putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a putative E3 ubiquitin-protein ligase RING1a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr01240 Biosynthesis of cofactors 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03013 Nucleocytoplasmic transport 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04148 Efferocytosis 2
nta00510 N-Glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03013 Nucleocytoplasmic transport 2
nta00330 Arginine and proline metabolism 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae04016 MAPK signaling pathway - plant 3
tae04626 Plant-pathogen interaction 3
tae03082 ATP-dependent chromatin remodeling 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
bdi03083 Polycomb repressive complex 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18103053 7456782 7459955 100776547 100819311 25493116 25487685 834451 839413 103827915 103839324 100267677 100267448 107901798 107961732 107934721 106401059 106411359 106418239 102616925 102608198 101248496 101258122 102605523 102581735 107777823 107792781 107798106 9272357 4327619 103645322 100383546 100279610 123079431 123062299 123138311 123443642 123444611 8064193 8065145 8060463 100833980 100846593 5724229
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