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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106448989   transcription termination factor MTEF18, mitochondrial-like 
 bna-r.1   106386376   transcription termination factor MTEF18, mitochondrial-like 
 bna-r.1   106365915   transcription termination factor MTEF18, mitochondrial-like 
 bna-r.1   106391271   transcription termination factor MTEF18, mitochondrial 
 bra-r.6   103850634   transcription termination factor MTEF18, mitochondrial 
 bra-r.6   103857647   transcription termination factor MTEF18, mitochondrial 
 ath-u.5   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G06810   transcription termination factor family protein 
 ghi-r.1   107891750   transcription termination factor MTEF18, mitochondrial 
 ghi-r.1   107921261   transcription termination factor MTEF18, mitochondrial 
 ghi-r.1   107948388   transcription termination factor MTEF18, mitochondrial 
 cit-r.1   102621440   transcription termination factor MTEF18, mitochondrial-like 
 cit-r.1   102621541   transcription termination factor MTEF18, mitochondrial-like 
 gma-u.5   100803162   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100807690   transcription termination factor MTEF18, mitochondrial 
 vvi-u.5   100241837   uncharacterized LOC100241837 
 vvi-u.5   100242606   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468939   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468940   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   112323605   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11429701   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11437920   transcription termination factor MTEF18, mitochondrial 
 sly-u.5   101267865   transcription termination factor MTEF18, mitochondrial-like 
 sly-u.5   101244846   transcription termination factor MTEF18, mitochondrial-like 
 sot-r.1   102586511   uncharacterized LOC102586511 
 sot-r.1   102589903   uncharacterized LOC102589903 
 nta-r.1   107767704   transcription termination factor MTEF18, mitochondrial 
 nta-r.1   107806687   transcription termination factor MTEF18, mitochondrial 
 nta-r.1   107819069   transcription termination factor MTEF18, mitochondrial 
 osa-u.5   4346047   transcription termination factor MTEF18, mitochondrial 
 zma-u.5   100286156   uncharacterized LOC100286156 
 tae-r.2   123151542   transcription termination factor MTEF18, mitochondrial 
 tae-r.2   123152211   transcription termination factor MTEF18, mitochondrial 
 tae-r.2   123180237   transcription termination factor MTEF18, mitochondrial 
 hvu-r.1   123443350   transcription termination factor MTEF18, mitochondrial-like 
 hvu-r.1   123424560   transcription termination factor MTEF18, mitochondrial-like 
 hvu-r.1   123411166   transcription termination factor MTEF18, mitochondrial 
 sbi-r.1   8062430   transcription termination factor MTEF18, mitochondrial 
 bdi-r.1   100822558   transcription termination factor MTEF18, mitochondrial 

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Top 50 coexpressed genes to 106448989 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106448989 (bna-r.1 coexpression data)

CoexMap"106448989"


bnaLOC106448989 | Entrez gene ID : 106448989    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 2 2 3 2 2 2 3 1 1 3 3 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (193 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (1590 genes)  IEA  
Protein XP_013746252.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto_mito 2,  nucl 1  (predict for XP_013746252.3)
Subcellular
localization
TargetP
mito 3  (predict for XP_013746252.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106448989
bna-r.1
for
106386376
bna-r.1
for
106365915
bna-r.1
for
106391271
bra-r.6
for
103850634
bra-r.6
for
103857647
ath-u.5
for
AT4G19650
ath-u.5
for
AT5G06810
ghi-r.1
for
107891750
ghi-r.1
for
107921261
ghi-r.1
for
107948388
cit-r.1
for
102621440
cit-r.1
for
102621541
gma-u.5
for
100803162
gma-u.5
for
100807690
vvi-u.5
for
100241837
vvi-u.5
for
100242606
ppo-u.5
for
7468939
ppo-u.5
for
7468940
ppo-u.5
for
112323605
mtr-u.5
for
11429701
mtr-u.5
for
11437920
sly-u.5
for
101267865
sly-u.5
for
101244846
sot-r.1
for
102586511
sot-r.1
for
102589903
nta-r.1
for
107767704
nta-r.1
for
107806687
nta-r.1
for
107819069
osa-u.5
for
4346047
zma-u.5
for
100286156
tae-r.2
for
123151542
tae-r.2
for
123152211
tae-r.2
for
123180237
hvu-r.1
for
123443350
hvu-r.1
for
123424560
hvu-r.1
for
123411166
sbi-r.1
for
8062430
bdi-r.1
for
100822558


Ortholog ID: 2490
Species bna bna bna bra bra ath ath ath ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu hvu hvu sbi bdi
Symbol LOC106448989 LOC106419046 LOC106437705 LOC103850634 LOC103827817 AT4G19650 AT5G06810 AT5G06811 LOC107891750 LOC107948388 LOC107895057 LOC102621440 LOC102621541 LOC100803162 LOC100807690 LOC100241837 LOC100242606 LOC7468939 LOC7468940 LOC112323605 LOC11429701 LOC11437920 LOC101267865 LOC101244846 LOC102586511 LOC102589903 LOC107767704 LOC107819069 LOC107823561 LOC4346047 LOC100286156 LOC123152211 LOC123159610 LOC123165780 LOC123443350 LOC123424560 LOC123410436 LOC8062430 LOC100822558
Function* transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial Mitochondrial transcription termination factor family protein transcription termination factor family protein transcription termination factor family protein transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100241837 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like uncharacterized LOC102586511 uncharacterized LOC102589903 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100286156 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106448989 106419046 106437705 103850634 103827817 827709 830572 28720838 107891750 107948388 107895057 102621440 102621541 100803162 100807690 100241837 100242606 7468939 7468940 112323605 11429701 11437920 101267865 101244846 102586511 102589903 107767704 107819069 107823561 4346047 100286156 123152211 123159610 123165780 123443350 123424560 123410436 8062430 100822558
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