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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107772647   pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like 
 nta-r.1   107803983   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 sly-u.5   101268344   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 sot-r.1   102582413   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ath-u.5   EMB2279   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100787028   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 vvi-u.5   100250871   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ppo-u.5   7490754   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 mtr-u.5   25479292   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ghi-r.1   107931850   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ghi-r.1   107936372   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 bna-r.1   106411276   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 bna-r.1   106367257   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 cit-r.1   102628683   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 osa-u.5   4325508   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 zma-u.5   103636169   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 tae-r.2   123078999   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 tae-r.2   123070592   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 tae-r.2   123061903   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 hvu-r.1   123444089   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 sbi-r.1   8068006   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 bdi-r.1   100829792   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 

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Top 50 coexpressed genes to 107772647 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107772647 (nta-r.1 coexpression data)

CoexMap"107772647"


ntaLOC107772647 | Entrez gene ID : 107772647      
Species nta sly sot ath gma vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi bra cre
Paralog 2 1 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (114 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016447623.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3,  cyto_nucl 3,  cysk_nucl 3  (predict for XP_016447623.2)
Subcellular
localization
TargetP
chlo 7,  scret 3  (predict for XP_016447623.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107772647
nta-r.1
for
107803983
sly-u.5
for
101268344
sot-r.1
for
102582413
ath-u.5
for
EMB2279
gma-u.5
for
100787028
vvi-u.5
for
100250871
ppo-u.5
for
7490754
mtr-u.5
for
25479292
ghi-r.1
for
107931850
ghi-r.1
for
107936372
bna-r.1
for
106411276
bna-r.1
for
106367257
cit-r.1
for
102628683
osa-u.5
for
4325508
zma-u.5
for
103636169
tae-r.2
for
123078999
tae-r.2
for
123070592
tae-r.2
for
123061903
hvu-r.1
for
123444089
sbi-r.1
for
8068006
bdi-r.1
for
100829792


Ortholog ID: 11492
Species nta nta sly sot ath gma vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107772647 LOC107803983 LOC101268344 LOC102582413 EMB2279 LOC100787028 LOC100250871 LOC7490754 LOC25479292 LOC107931850 LOC107936372 LOC106411276 LOC106367257 LOC102628683 LOC4325508 LOC103636169 LOC123078999 LOC123070592 LOC123061903 LOC123444089 LOC8068006 LOC100829792
Function* pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107772647 107803983 101268344 102582413 839941 100787028 100250871 7490754 25479292 107931850 107936372 106411276 106367257 102628683 4325508 103636169 123078999 123070592 123061903 123444089 8068006 100829792
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