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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490754   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ppo-r.4   7490754   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 gma-u.5   100787028   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 mtr-u.5   25479292   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ath-u.5   EMB2279   pentatricopeptide (PPR) repeat-containing protein 
 vvi-u.5   100250871   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 sly-u.5   101268344   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 osa-u.5   4325508   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 zma-u.5   103636169   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 

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Top 50 coexpressed genes to 7490754 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490754 (ppo-u.5 coexpression data)

CoexMap"7490754"


ppoLOC7490754 | Entrez gene ID : 7490754    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024448142.1 [sequence] [blastp]
XP_024448150.1 [sequence] [blastp]
XP_052302780.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 3  (predict for XP_024448142.1)
nucl 6,  chlo 3  (predict for XP_024448150.1)
nucl 6,  chlo 4  (predict for XP_052302780.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_024448142.1)
other 6,  chlo 5  (predict for XP_024448150.1)
other 6,  chlo 5  (predict for XP_052302780.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490754

.
ppo-r.4
for
7490754

.
gma-u.5
for
100787028

.
mtr-u.5
for
25479292

.
ath-u.5
for
EMB2279

.
vvi-u.5
for
100250871

.
sly-u.5
for
101268344

.
osa-u.5
for
4325508

.
zma-u.5
for
103636169

.


Ortholog ID: 11492
Species ath gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB2279 LOC100787028 LOC101268344 LOC4325508 LOC103636169 LOC100250871 LOC7490754 LOC25479292 LOC123078999 LOC123070592 LOC123444089 LOC107936372 LOC107931850 LOC106411276 LOC106367257 LOC8068006 LOC102582413 LOC102628683 LOC100829792 LOC107803983 LOC107772647
Function* pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839941 100787028 101268344 4325508 103636169 100250871 7490754 25479292 123078999 123070592 123444089 107936372 107931850 106411276 106367257 8068006 102582413 102628683 100829792 107803983 107772647
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