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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936372   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ath-u.5   EMB2279   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100787028   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 vvi-u.5   100250871   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 ppo-u.5   7490754   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 mtr-u.5   25479292   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 sly-u.5   101268344   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 osa-u.5   4325508   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 
 zma-u.5   103636169   pentatricopeptide repeat-containing protein At1g30610, chloroplastic 

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Top 50 coexpressed genes to 107936372 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936372 (ghi-r.1 coexpression data)

CoexMap"107936372"


ghiLOC107936372 | Entrez gene ID : 107936372    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (180 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016724580.1 [sequence] [blastp]
XP_016724581.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016724580.1)
cyto 4,  nucl 4,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016724581.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016724580.1)
other 6,  chlo 3  (predict for XP_016724581.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936372
ath-u.5
for
EMB2279
gma-u.5
for
100787028
vvi-u.5
for
100250871
ppo-u.5
for
7490754
mtr-u.5
for
25479292
sly-u.5
for
101268344
osa-u.5
for
4325508
zma-u.5
for
103636169


Ortholog ID: 11492
Species ghi ghi ath bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107936372 LOC107931850 EMB2279 LOC106411276 LOC106367257 LOC102628683 LOC100787028 LOC100250871 LOC7490754 LOC25479292 LOC101268344 LOC102582413 LOC107803983 LOC107772647 LOC4325508 LOC103636169 LOC123078999 LOC123070592 LOC123444089 LOC8068006 LOC100829792
Function* pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic pentatricopeptide repeat-containing protein At1g30610, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936372 107931850 839941 106411276 106367257 102628683 100787028 100250871 7490754 25479292 101268344 102582413 107803983 107772647 4325508 103636169 123078999 123070592 123444089 8068006 100829792
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