ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107784083	uncharacterized LOC107784083
sly-u.5	101264269	uncharacterized LOC101264269
ath-u.5	AT3G19870	AP-5 complex subunit beta-like protein
gma-u.5	100801171	AP-5 complex subunit beta-1
gma-u.5	100789330	AP-5 complex subunit beta-1
vvi-u.5	100249600	uncharacterized LOC100249600
ppo-u.5	7460683	uncharacterized LOC7460683
mtr-u.5	11438115	AP-5 complex subunit beta-1
osa-u.5	4331238	uncharacterized LOC4331238
zma-u.5	103627911	uncharacterized LOC103627911

functional annotation

KEGG

GO BP

GO:0016197 [list] [network] endosomal transport

(124 genes)

IEA

GO CC

GO:0030119 [list] [network] AP-type membrane coat adaptor complex

(43 genes)

IEA

GO MF

Protein

XP_016460634.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, plas 2, cysk_nucl 1, mito 1, vacu 1, E.R. 1, E.R._vacu 1

(predict for XP_016460634.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016460634.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107784083	sly-u.5 for 101264269	ath-u.5 for AT3G19870	gma-u.5 for 100801171	gma-u.5 for 100789330	vvi-u.5 for 100249600	ppo-u.5 for 7460683	mtr-u.5 for 11438115	osa-u.5 for 4331238	zma-u.5 for 103627911

Ortholog ID: 10099

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107784083

uncharacterized LOC107811229

uncharacterized LOC101264269

uncharacterized LOC102605092

AP-5 complex subunit beta-like protein

AP-5 complex subunit beta-1

uncharacterized LOC100249600

uncharacterized LOC7460683

AP-5 complex subunit beta-1

uncharacterized LOC121216004

uncharacterized LOC107911567

AP-5 complex subunit beta-1-like

AP-5 complex subunit beta-1

uncharacterized LOC102614078

uncharacterized LOC4331238

uncharacterized LOC103627911

uncharacterized LOC123129172

uncharacterized LOC123146342

uncharacterized LOC123405913

uncharacterized LOC8056252

uncharacterized LOC100842049

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta04141	Protein processing in endoplasmic reticulum	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
sly00510	N-Glycan biosynthesis	2
sly00020	Citrate cycle (TCA cycle)	2
sly00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2
bra03083	Polycomb repressive complex	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3
bna04120	Ubiquitin mediated proteolysis	2
bna03020	RNA polymerase	2
bna03420	Nucleotide excision repair	2
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00020	Citrate cycle (TCA cycle)	2
bna00785	Lipoic acid metabolism	2
bna01200	Carbon metabolism	2
bna01210	2-Oxocarboxylic acid metabolism	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma03008	Ribosome biogenesis in eukaryotes	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3
sbi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

107784083

107811229

101264269

102605092

821524

100789330

100801171

103836891

100249600

7460683

11438115

121216004

107911567

106352965

106346328

102614078

4331238

103627911

123129172

123146342

123405913

8056252

100842049

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107784083 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784083 (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	tae	cre	sot
Paralog	1	1	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107784083 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784083 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**