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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107798755   uncharacterized LOC107798755 
 nta-r.1   107811343   uncharacterized LOC107811343 
 sly-u.5   101267115   uncharacterized LOC101267115 
 sot-r.1   102579998   RNA-binding protein EWS 
 ath-u.5   AT4G28990   RNA-binding protein-like protein 
 gma-u.5   100817587   uncharacterized LOC100817587 
 gma-u.5   100799651   RNA-binding protein EWS 
 bra-r.6   103853943   uncharacterized LOC103853943 
 vvi-u.5   100250827   transcription initiation factor TFIID subunit 15b 
 ppo-u.5   7476292   uncharacterized LOC7476292 
 ppo-u.5   18100420   uncharacterized LOC18100420 
 mtr-u.5   11438547   uncharacterized LOC11438547 
 ghi-r.1   107939488   transcription initiation factor TFIID subunit 15 
 ghi-r.1   107932860   transcription initiation factor TFIID subunit 15 
 bna-r.1   125607223   serine/arginine repetitive matrix protein 1-like 
 bna-r.1   106407436   pollen-specific leucine-rich repeat extensin-like protein 3 
 cit-r.1   102624215   transcription initiation factor TFIID subunit 15 
 osa-u.5   4340930   uncharacterized LOC4340930 
 osa-u.5   4328998   uncharacterized LOC4328998 
 zma-u.5   100280706   uncharacterized LOC100280706 
 tae-r.2   123166618   serine/arginine repetitive matrix protein 1 
 tae-r.2   123160704   serine/arginine repetitive matrix protein 1 
 tae-r.2   123147845   serine/arginine repetitive matrix protein 1 
 hvu-r.1   123413391   serine/arginine repetitive matrix protein 1 
 sbi-r.1   8060119   serine/arginine repetitive matrix protein 1 
 bdi-r.1   100846488   TATA-binding protein-associated factor 2N 

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Top 50 coexpressed genes to 107798755 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107798755 (nta-r.1 coexpression data)

CoexMap"107798755"


ntaLOC107798755 | Entrez gene ID : 107798755      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 2 1 2 2 1 2 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016477273.1 [sequence] [blastp]
XP_016477274.1 [sequence] [blastp]
XP_016477275.1 [sequence] [blastp]
XP_075084082.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_016477273.1)
nucl 9  (predict for XP_016477274.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_016477275.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_075084082.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016477273.1)
other 8  (predict for XP_016477274.1)
other 8  (predict for XP_016477275.1)
other 8  (predict for XP_075084082.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107798755
nta-r.1
for
107811343
sly-u.5
for
101267115
sot-r.1
for
102579998
ath-u.5
for
AT4G28990
gma-u.5
for
100817587
gma-u.5
for
100799651
bra-r.6
for
103853943
vvi-u.5
for
100250827
ppo-u.5
for
7476292
ppo-u.5
for
18100420
mtr-u.5
for
11438547
ghi-r.1
for
107939488
ghi-r.1
for
107932860
bna-r.1
for
125607223
bna-r.1
for
106407436
cit-r.1
for
102624215
osa-u.5
for
4340930
osa-u.5
for
4328998
zma-u.5
for
100280706
tae-r.2
for
123166618
tae-r.2
for
123160704
tae-r.2
for
123147845
hvu-r.1
for
123413391
sbi-r.1
for
8060119
bdi-r.1
for
100846488


Ortholog ID: 7680
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa osa zma tae tae tae hvu sbi bdi
Symbol LOC107798755 LOC107811343 LOC101267115 LOC102579998 AT4G28990 LOC100817587 LOC100799651 LOC103853943 LOC100250827 LOC7476292 LOC18100420 LOC11438547 LOC107939488 LOC107932860 LOC125607223 LOC106407436 LOC125610037 LOC102624215 LOC4340930 LOC4328998 LOC100280706 LOC123166618 LOC123160704 LOC123147845 LOC123413391 LOC8060119 LOC100846488
Function* uncharacterized LOC107798755 uncharacterized LOC107811343 uncharacterized LOC101267115 RNA-binding protein EWS RNA-binding protein-like protein uncharacterized LOC100817587 RNA-binding protein EWS uncharacterized LOC103853943 transcription initiation factor TFIID subunit 15b uncharacterized LOC7476292 uncharacterized LOC18100420 uncharacterized LOC11438547 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 serine/arginine repetitive matrix protein 1-like pollen-specific leucine-rich repeat extensin-like protein 3 uncharacterized LOC125610037 transcription initiation factor TFIID subunit 15 uncharacterized LOC4340930 uncharacterized LOC4328998 uncharacterized LOC100280706 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 TATA-binding protein-associated factor 2N
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03013 Nucleocytoplasmic transport 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna03018 RNA degradation 4
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107798755 107811343 101267115 102579998 829020 100817587 100799651 103853943 100250827 7476292 18100420 11438547 107939488 107932860 125607223 106407436 125610037 102624215 4340930 4328998 100280706 123166618 123160704 123147845 123413391 8060119 100846488
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