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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107812947   uncharacterized LOC107812947 
 sly-u.5   101268392   uncharacterized LOC101268392 
 sot-r.1   102584346   RNA-binding protein 38 
 ath-u.5   AT1G20880   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G76460   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100779244   RNA-binding protein 38 
 gma-u.5   100782606   RNA-binding protein 38 
 bra-r.6   103872876   RNA-binding protein 24 
 bra-r.6   103829408   RNA-binding protein 24 
 bra-r.6   103835770   RNA-binding protein 24 
 vvi-u.5   100258188   uncharacterized LOC100258188 
 ppo-u.5   7485663   uncharacterized LOC7485663 
 ppo-u.5   7471743   uncharacterized LOC7471743 
 mtr-u.5   11412629   RNA-binding protein 38 
 ghi-r.1   107917869   RNA-binding protein 24-B 
 ghi-r.1   107922223   RNA-binding protein 38 
 bna-r.1   111207197   RNA-binding protein 24-B 
 bna-r.1   106446233   RNA-binding protein 24 
 bna-r.1   106421667   RNA-binding protein 24-B 
 cit-r.1   102618742   uncharacterized LOC102618742 
 cit-r.1   102608795   uncharacterized LOC102608795 
 osa-u.5   4330510   RNA-binding protein 24 
 osa-u.5   4341556   uncharacterized LOC4341556 
 zma-u.5   103638790   RNA-binding protein 38 
 zma-u.5   100279322   uncharacterized LOC100279322 
 zma-u.5   100501435   uncharacterized LOC100501435 
 tae-r.2   123128176   RNA-binding protein 24 
 tae-r.2   123137987   RNA-binding protein 24 
 tae-r.2   123145274   RNA-binding protein 24-B 
 hvu-r.1   123401010   RNA-binding protein 24-like 
 hvu-r.1   123410805   RNA-binding protein 24-A-like 
 sbi-r.1   8083468   RNA-binding protein 24-A 
 sbi-r.1   8073831   RNA-binding protein 24 
 bdi-r.1   100833583   RNA-binding protein 24 
 bdi-r.1   100823039   RNA-binding protein 24-A 

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Top 50 coexpressed genes to 107812947 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107812947 (nta-r.1 coexpression data)

CoexMap"107812947"


ntaLOC107812947 | Entrez gene ID : 107812947      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 3 1 2 1 2 3 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_075082108.1 [sequence] [blastp]
XP_075082109.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_075082108.1)
nucl 4,  chlo 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_075082109.1)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_075082108.1)
other 7,  mito 4  (predict for XP_075082109.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107812947
sly-u.5
for
101268392
sot-r.1
for
102584346
ath-u.5
for
AT1G20880
ath-u.5
for
AT1G76460
gma-u.5
for
100779244
gma-u.5
for
100782606
bra-r.6
for
103872876
bra-r.6
for
103829408
bra-r.6
for
103835770
vvi-u.5
for
100258188
ppo-u.5
for
7485663
ppo-u.5
for
7471743
mtr-u.5
for
11412629
ghi-r.1
for
107917869
ghi-r.1
for
107922223
bna-r.1
for
111207197
bna-r.1
for
106446233
bna-r.1
for
106421667
cit-r.1
for
102618742
cit-r.1
for
102608795
osa-u.5
for
4330510
osa-u.5
for
4341556
zma-u.5
for
103638790
zma-u.5
for
100279322
zma-u.5
for
100501435
tae-r.2
for
123128176
tae-r.2
for
123137987
tae-r.2
for
123145274
hvu-r.1
for
123401010
hvu-r.1
for
123410805
sbi-r.1
for
8083468
sbi-r.1
for
8073831
bdi-r.1
for
100833583
bdi-r.1
for
100823039


Ortholog ID: 4001
Species nta sly sot ath ath gma gma bra bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107812947 LOC101268392 LOC102584346 AT1G20880 AT1G76460 LOC100779244 LOC100782606 LOC103872876 LOC103835770 LOC103832109 LOC100258188 LOC7485663 LOC7471743 LOC11412629 LOC107917869 LOC107922223 LOC111207197 LOC106421379 LOC106347291 LOC102618742 LOC102608795 LOC4330510 LOC4341556 LOC103638790 LOC100279322 LOC100284337 LOC123128176 LOC123145274 LOC123164723 LOC123401010 LOC123410805 LOC8083468 LOC8073831 LOC100833583 LOC100823039
Function* uncharacterized LOC107812947 uncharacterized LOC101268392 RNA-binding protein 38 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 38 RNA-binding protein 38 RNA-binding protein 24 RNA-binding protein 24 RNA-binding protein 24-B uncharacterized LOC100258188 uncharacterized LOC7485663 uncharacterized LOC7471743 RNA-binding protein 38 RNA-binding protein 24-B RNA-binding protein 38 RNA-binding protein 24-B RNA-binding protein 24 RNA-binding protein 24 uncharacterized LOC102618742 uncharacterized LOC102608795 RNA-binding protein 24 uncharacterized LOC4341556 RNA-binding protein 38 uncharacterized LOC100279322 uncharacterized LOC100284337 RNA-binding protein 24 RNA-binding protein 24-B RNA-binding protein 38 RNA-binding protein 24-like RNA-binding protein 24-A-like RNA-binding protein 24-A RNA-binding protein 24 RNA-binding protein 24 RNA-binding protein 24-A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00650 Butanoate metabolism 2
nta03015 mRNA surveillance pathway 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma00513 Various types of N-glycan biosynthesis 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi04136 Autophagy - other 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit04382 Cornified envelope formation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00904 Diterpenoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107812947 101268392 102584346 838681 843979 100779244 100782606 103872876 103835770 103832109 100258188 7485663 7471743 11412629 107917869 107922223 111207197 106421379 106347291 102618742 102608795 4330510 4341556 103638790 100279322 100284337 123128176 123145274 123164723 123401010 123410805 8083468 8073831 100833583 100823039
The preparation time of this page was 1.7 [sec].