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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8073831   RNA-binding protein 24 
 zma-u.5   103638790   RNA-binding protein 38 
 zma-u.5   100501435   uncharacterized LOC100501435 
 zma-u.5   100279322   uncharacterized LOC100279322 
 osa-u.5   4341556   uncharacterized LOC4341556 
 osa-u.5   4330510   RNA-binding protein 24 
 ath-u.5   AT1G20880   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G76460   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100782606   RNA-binding protein 38 
 gma-u.5   100779244   RNA-binding protein 38 
 sly-u.5   101268392   uncharacterized LOC101268392 
 vvi-u.5   100258188   uncharacterized LOC100258188 
 ppo-u.5   7485663   uncharacterized LOC7485663 
 ppo-u.5   7471743   uncharacterized LOC7471743 
 mtr-u.5   11412629   RNA-binding protein 38 

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Top 50 coexpressed genes to 8073831 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8073831 (sbi-r.1 coexpression data)

CoexMap"8073831"


sbiLOC8073831 | Entrez gene ID : 8073831      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002454395.1 [sequence] [blastp]
XP_021314800.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_002454395.1)
nucl 9,  cyto_nucl 5  (predict for XP_021314800.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_002454395.1)
chlo 7,  mito 4  (predict for XP_021314800.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8073831

.
zma-u.5
for
103638790

.
zma-u.5
for
100501435

.
zma-u.5
for
100279322

.
osa-u.5
for
4341556

.
osa-u.5
for
4330510

.
ath-u.5
for
AT1G20880

.
ath-u.5
for
AT1G76460

.
gma-u.5
for
100782606

.
gma-u.5
for
100779244

.
sly-u.5
for
101268392

.
vvi-u.5
for
100258188

.
ppo-u.5
for
7485663

.
ppo-u.5
for
7471743

.
mtr-u.5
for
11412629

.


Ortholog ID: 4001
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit cit bdi bdi nta
Symbol AT1G20880 AT1G76460 LOC100782606 LOC100779244 LOC101268392 LOC4330510 LOC4341556 LOC103638790 LOC100279322 LOC103832109 LOC103872876 LOC100258188 LOC7471743 LOC7485663 LOC11412629 LOC123164723 LOC123145274 LOC123401010 LOC107917869 LOC107922223 LOC106347291 LOC111207197 LOC8083468 LOC8073831 LOC102584346 LOC102618742 LOC102608795 LOC100833583 LOC100823039 LOC107812947
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 38 RNA-binding protein 38 uncharacterized LOC101268392 RNA-binding protein 24 uncharacterized LOC4341556 RNA-binding protein 38 uncharacterized LOC100279322 RNA-binding protein 24-B RNA-binding protein 24 uncharacterized LOC100258188 uncharacterized LOC7471743 uncharacterized LOC7485663 RNA-binding protein 38 RNA-binding protein 38 RNA-binding protein 24-B RNA-binding protein 24-like RNA-binding protein 24-B RNA-binding protein 38 RNA-binding protein 24 RNA-binding protein 24-B RNA-binding protein 24-A RNA-binding protein 24 RNA-binding protein 38 uncharacterized LOC102618742 uncharacterized LOC102608795 RNA-binding protein 24 RNA-binding protein 24-A uncharacterized LOC107812947
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma00513 Various types of N-glycan biosynthesis 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi04136 Autophagy - other 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
cit04382 Cornified envelope formation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00650 Butanoate metabolism 2
nta03015 mRNA surveillance pathway 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838681 843979 100782606 100779244 101268392 4330510 4341556 103638790 100279322 103832109 103872876 100258188 7471743 7485663 11412629 123164723 123145274 123401010 107917869 107922223 106347291 111207197 8083468 8073831 102584346 102618742 102608795 100833583 100823039 107812947
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