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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107894572   probable histone H2AXb 
 ghi-r.1   107903497   histone H2A.6 
 ghi-r.1   107952215   histone H2AX 
 ath-u.5   HTA10   histone H2A 10 
 ath-u.5   HTA13   histone H2A 13 
 ath-u.5   HTA2   histone H2A 2 
 bra-r.6   103871626   probable histone H2AXa 
 bra-r.6   103836372   probable histone H2AXa 
 bra-r.6   103835846   probable histone H2A.2 
 bna-r.1   106445749   probable histone H2A.3 
 bna-r.1   106451851   probable histone H2A.2 
 bna-r.1   106453183   probable histone H2AXa 
 cit-r.1   102618811   histone H2AX 
 cit-r.1   102619114   histone H2AX 
 cit-r.1   102609655   histone H2A.6 
 gma-u.5   100305465   uncharacterized LOC100305465 
 gma-u.5   100782447   probable histone H2A.1 
 gma-u.5   100818215   histone H2AX 
 vvi-u.5   100254490   histone H2AX 
 vvi-u.5   100257319   histone H2AX-like 
 vvi-u.5   100259607   histone H2AX 
 ppo-u.5   112323895   histone H2AX 
 ppo-u.5   7494319   probable histone H2A.3 
 ppo-u.5   18109775   histone H2AX 
 mtr-u.5   11408670   histone H2A.6 
 mtr-u.5   11409476   histone H2A.6 
 mtr-u.5   11423173   histone H2AX 
 sly-u.5   101248985   histone H2AX-like 
 sly-u.5   101264975   histone H2AX-like 
 sly-u.5   101262690   histone H2A.6 
 sot-r.1   102586233   histone H2A.6-like 
 sot-r.1   102582157   probable histone H2A.1 
 nta-r.1   107776555   histone H2AX 
 nta-r.1   107774816   putative histone H2AXb 
 nta-r.1   107770854   histone H2A.6 
 osa-u.5   4333939   probable histone H2AXa 
 osa-u.5   4343519   probable histone H2A.2 
 osa-u.5   4352128   probable histone H2A.7 
 zma-u.5   100193816   uncharacterized LOC100193816 
 zma-u.5   100194327   Histone H2A 
 zma-u.5   100273666   uncharacterized LOC100273666 
 tae-r.2   123149422   probable histone H2AXb 
 tae-r.2   123099500   histone H2AX 
 tae-r.2   123094377   probable histone H2AXa 
 hvu-r.1   123407816   probable histone H2AXb 
 hvu-r.1   123425798   probable histone H2A.2 
 hvu-r.1   123425799   histone H2A.4 
 sbi-r.1   8055640   probable histone H2AXb 
 sbi-r.1   8059983   probable histone H2AXa 
 sbi-r.1   8064629   probable histone H2AXb 
 bdi-r.1   100846160   probable histone H2AXa 
 bdi-r.1   100830394   probable histone H2A.2 
 bdi-r.1   100830704   probable histone H2A.7 
 cre-r.1   CHLRE_17g714500v5   uncharacterized protein 
 cre-r.1   CHLRE_17g714100v5   uncharacterized protein 
 cre-r.1   CHLRE_06g274200v5   uncharacterized protein 

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Top 50 coexpressed genes to 107894572 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107894572 (ghi-r.1 coexpression data)

CoexMap"107894572"


ghiLOC107894572 | Entrez gene ID : 107894572    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03082 [list] [network] ATP-dependent chromatin remodeling (185 genes)
GO BP
GO:0031507 [list] [network] heterochromatin formation  (109 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (173 genes)  IEA  
GO:0000785 [list] [network] chromatin  (561 genes)  IEA  
GO MF
GO:0030527 [list] [network] structural constituent of chromatin  (151 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (254 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016675323.1 [sequence] [blastp]
XP_040931057.1 [sequence] [blastp]
XP_040931059.1 [sequence] [blastp]
XP_040931060.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_016675323.1)
nucl 8,  pero 1  (predict for XP_040931057.1)
nucl 8,  pero 1  (predict for XP_040931059.1)
nucl 8,  pero 1  (predict for XP_040931060.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for XP_016675323.1)
other 5,  chlo 3  (predict for XP_040931057.1)
other 5,  chlo 3  (predict for XP_040931059.1)
other 5,  chlo 3  (predict for XP_040931060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107894572
ghi-r.1
for
107903497
ghi-r.1
for
107952215
ath-u.5
for
HTA10
ath-u.5
for
HTA13
ath-u.5
for
HTA2
bra-r.6
for
103871626
bra-r.6
for
103836372
bra-r.6
for
103835846
bna-r.1
for
106445749
bna-r.1
for
106451851
bna-r.1
for
106453183
cit-r.1
for
102618811
cit-r.1
for
102619114
cit-r.1
for
102609655
gma-u.5
for
100305465
gma-u.5
for
100782447
gma-u.5
for
100818215
vvi-u.5
for
100254490
vvi-u.5
for
100257319
vvi-u.5
for
100259607
ppo-u.5
for
112323895
ppo-u.5
for
7494319
ppo-u.5
for
18109775
mtr-u.5
for
11408670
mtr-u.5
for
11409476
mtr-u.5
for
11423173
sly-u.5
for
101248985
sly-u.5
for
101264975
sly-u.5
for
101262690
sot-r.1
for
102586233
sot-r.1
for
102582157
nta-r.1
for
107776555
nta-r.1
for
107774816
nta-r.1
for
107770854
osa-u.5
for
4333939
osa-u.5
for
4343519
osa-u.5
for
4352128
zma-u.5
for
100193816
zma-u.5
for
100194327
zma-u.5
for
100273666
tae-r.2
for
123149422
tae-r.2
for
123099500
tae-r.2
for
123094377
hvu-r.1
for
123407816
hvu-r.1
for
123425798
hvu-r.1
for
123425799
sbi-r.1
for
8055640
sbi-r.1
for
8059983
sbi-r.1
for
8064629
bdi-r.1
for
100846160
bdi-r.1
for
100830394
bdi-r.1
for
100830704
cre-r.1
for
CHLRE_17g714500v5
cre-r.1
for
CHLRE_17g714100v5
cre-r.1
for
CHLRE_06g274200v5


Ortholog ID: 242
Species ghi ghi ghi ath ath ath bra bra bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC107903497 LOC107920392 LOC107899136 HTA10 HTA13 H2AXA LOC103832842 LOC103844917 LOC125603080 LOC106345992 LOC102618811 LOC102619114 LOC102620423 LOC100818215 LOC106798115 LOC100793396 LOC100254490 LOC100257319 LOC100259607 LOC112323895 LOC18109775 LOC18095880 LOC11408670 LOC11443483 LOC11430690 LOC101264975 LOC101262690 LOC101256806 LOC102586233 LOC102582157 LOC102592368 LOC107780380 LOC107800855 LOC107822337 LOC4333939 LOC4352128 LOC9267462 LOC100193816 LOC100194327 LOC100273666 LOC123115855 LOC123161694 LOC123044613 LOC123425798 LOC123425799 LOC123401046 LOC8059983 LOC8081715 LOC8081716 LOC100846160 LOC100830394 LOC100830704 CHLRE_17g714100v5 CHLRE_06g268050v5 CHLRE_12g506250v5
Function* histone H2A.6 probable histone H2A.1 probable histone H2AXb histone H2A 10 histone H2A 13 Histone superfamily protein probable histone H2A.1 histone H2A.6 probable histone H2A.2 probable histone H2A.2 histone H2AX histone H2AX histone H2AX histone H2AX histone H2AX probable histone H2A.3 histone H2AX histone H2AX-like histone H2AX histone H2AX histone H2AX histone H2A.6 histone H2A.6 probable histone H2AXb histone H2AX histone H2AX-like histone H2A.6 probable histone H2AXb histone H2A.6-like probable histone H2A.1 probable histone H2AXb histone H2A.6-like histone H2AX-like histone H2A.6 probable histone H2AXa probable histone H2A.7 probable histone H2A.3 uncharacterized LOC100193816 Histone H2A uncharacterized LOC100273666 probable histone H2AXb probable histone H2AXb histone H2A.4-like probable histone H2A.2 histone H2A.4 probable histone H2AXb probable histone H2AXa probable histone H2A.1 probable histone H2A.2 probable histone H2AXa probable histone H2A.2 probable histone H2A.7 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
bra00010 Glycolysis / Gluconeogenesis 2
bra00620 Pyruvate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 5
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00240 Pyrimidine metabolism 3
vvi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi01232 Nucleotide metabolism 3
vvi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00240 Pyrimidine metabolism 3
sot01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107903497 107920392 107899136 841528 821614 837409 103832842 103844917 125603080 106345992 102618811 102619114 102620423 100818215 106798115 100793396 100254490 100257319 100259607 112323895 18109775 18095880 11408670 11443483 11430690 101264975 101262690 101256806 102586233 102582157 102592368 107780380 107800855 107822337 4333939 4352128 9267462 100193816 100194327 100273666 123115855 123161694 123044613 123425798 123425799 123401046 8059983 8081715 8081716 100846160 100830394 100830704 5725954 66053636 5716480
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