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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107910749   probable E3 ubiquitin-protein ligase RHG1A 
 ghi-r.1   107945132   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107943852   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107941534   probable E3 ubiquitin-protein ligase RHG1A 
 ath-u.5   MBR1   RING/U-box superfamily protein 
 ath-u.5   MBR2   RING/U-box superfamily protein 
 ath-u.5   AT5G42940   RING/U-box superfamily protein 
 bra-r.6   103839267   probable E3 ubiquitin-protein ligase RHG1A 
 bra-r.6   103847996   E3 ubiquitin-protein ligase MBR1 
 bna-r.1   125577881   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106446819   E3 ubiquitin-protein ligase MBR1 
 bna-r.1   106445641   E3 ubiquitin-protein ligase MBR1 
 cit-r.1   102620199   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102620487   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102629270   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100783014   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100784575   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100791026   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100267740   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100258840   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7462870   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   7465027   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7490042   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11414526   probable E3 ubiquitin-protein ligase RHG1A 
 mtr-u.5   11446940   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101260877   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101249818   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101261170   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   102596025   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   107058063   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   102590676   probable E3 ubiquitin-protein ligase HIP1 
 nta-r.1   107797011   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107815888   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107765500   E3 ubiquitin-protein ligase MBR2 
 osa-u.5   9272591   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100281500   uncharacterized LOC100281500 
 zma-u.5   109943116   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100383211   putative RING zinc finger domain superfamily protein 
 tae-r.2   123054931   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123047118   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123190785   probable E3 ubiquitin-protein ligase HIP1 
 hvu-r.1   123428152   probable E3 ubiquitin-protein ligase HIP1 
 sbi-r.1   8068482   probable E3 ubiquitin-protein ligase HIP1 
 bdi-r.1   100835376   probable E3 ubiquitin-protein ligase HIP1 

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Top 50 coexpressed genes to 107910749 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107910749 (ghi-r.1 coexpression data)

CoexMap"107910749"


ghiLOC107910749 | Entrez gene ID : 107910749    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 2 3 2 3 3 3 1 3 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016694213.1 [sequence] [blastp]
XP_016694214.1 [sequence] [blastp]
XP_016694215.1 [sequence] [blastp]
XP_016694216.1 [sequence] [blastp]
XP_016694217.1 [sequence] [blastp]
XP_016694218.1 [sequence] [blastp]
XP_016694219.1 [sequence] [blastp]
XP_040943821.1 [sequence] [blastp]
XP_040943822.1 [sequence] [blastp]
XP_040943823.1 [sequence] [blastp]
XP_040943824.1 [sequence] [blastp]
XP_040943825.1 [sequence] [blastp]
XP_040943827.1 [sequence] [blastp]
XP_040943828.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cysk 1  (predict for XP_016694213.1)
nucl 9,  cysk 1  (predict for XP_016694214.1)
nucl 9,  cysk 1  (predict for XP_016694215.1)
nucl 9,  cysk 1  (predict for XP_016694216.1)
nucl 9,  cysk 1  (predict for XP_016694217.1)
nucl 9,  cysk 1  (predict for XP_016694218.1)
nucl 9,  cysk 1  (predict for XP_016694219.1)
nucl 9,  cysk 1  (predict for XP_040943821.1)
nucl 9,  cysk 1  (predict for XP_040943822.1)
nucl 9,  cysk 1  (predict for XP_040943823.1)
nucl 9,  cysk 1  (predict for XP_040943824.1)
nucl 9  (predict for XP_040943825.1)
nucl 10  (predict for XP_040943827.1)
nucl 10  (predict for XP_040943828.1)
Subcellular
localization
TargetP
other 3  (predict for XP_016694213.1)
other 3  (predict for XP_016694214.1)
other 3  (predict for XP_016694215.1)
other 3  (predict for XP_016694216.1)
other 3  (predict for XP_016694217.1)
other 3  (predict for XP_016694218.1)
other 3  (predict for XP_016694219.1)
other 3  (predict for XP_040943821.1)
other 3  (predict for XP_040943822.1)
other 3  (predict for XP_040943823.1)
other 3  (predict for XP_040943824.1)
other 7  (predict for XP_040943825.1)
other 7  (predict for XP_040943827.1)
other 7  (predict for XP_040943828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107910749
ghi-r.1
for
107945132
ghi-r.1
for
107943852
ghi-r.1
for
107941534
ath-u.5
for
MBR1
ath-u.5
for
MBR2
ath-u.5
for
AT5G42940
bra-r.6
for
103839267
bra-r.6
for
103847996
bna-r.1
for
125577881
bna-r.1
for
106446819
bna-r.1
for
106445641
cit-r.1
for
102620199
cit-r.1
for
102620487
cit-r.1
for
102629270
gma-u.5
for
100783014
gma-u.5
for
100784575
gma-u.5
for
100791026
vvi-u.5
for
100267740
vvi-u.5
for
100258840
ppo-u.5
for
7462870
ppo-u.5
for
7465027
ppo-u.5
for
7490042
mtr-u.5
for
11414526
mtr-u.5
for
11446940
sly-u.5
for
101260877
sly-u.5
for
101249818
sly-u.5
for
101261170
sot-r.1
for
102596025
sot-r.1
for
107058063
sot-r.1
for
102590676
nta-r.1
for
107797011
nta-r.1
for
107815888
nta-r.1
for
107765500
osa-u.5
for
9272591
zma-u.5
for
100281500
zma-u.5
for
109943116
zma-u.5
for
100383211
tae-r.2
for
123054931
tae-r.2
for
123047118
tae-r.2
for
123190785
hvu-r.1
for
123428152
sbi-r.1
for
8068482
bdi-r.1
for
100835376


Ortholog ID: 1370
Species ghi ghi ghi ath ath ath bra bra bna cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi
Symbol LOC107894280 LOC107938056 LOC121217803 MBR2 AT5G42940 AT1G45180 LOC103828003 LOC103844361 LOC106371878 LOC102620199 LOC102620487 LOC102629270 LOC100783014 LOC100809024 LOC100820322 LOC100267740 LOC100258840 LOC7462870 LOC7465027 LOC7490042 LOC11414526 LOC11446940 LOC101260877 LOC101249818 LOC101262398 LOC102587478 LOC102587147 LOC102580028 LOC107797011 LOC107767353 LOC107768864 LOC9272591 LOC100281500 LOC109943116 LOC100383211 LOC123054931 LOC123047118 LOC123190785 LOC123428152 LOC8068482 LOC100835376
Function* E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR1 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like putative E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 putative E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC100281500 probable E3 ubiquitin-protein ligase HIP1 putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00670 One carbon pool by folate 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 4
tae01320 Sulfur cycle 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00920 Sulfur metabolism 3
tae01320 Sulfur cycle 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107894280 107938056 121217803 829550 834306 841086 103828003 103844361 106371878 102620199 102620487 102629270 100783014 100809024 100820322 100267740 100258840 7462870 7465027 7490042 11414526 11446940 101260877 101249818 101262398 102587478 102587147 102580028 107797011 107767353 107768864 9272591 100281500 109943116 100383211 123054931 123047118 123190785 123428152 8068482 100835376
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