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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107915460   60S ribosomal protein L13a-4 
 ath-u.5   AT3G07110   Ribosomal protein L13 family protein 
 ath-u.5   AT3G24830   Ribosomal protein L13 family protein 
 ath-u.5   AT4G13170   Ribosomal protein L13 family protein 
 gma-u.5   100808497   60S ribosomal protein L13a-4 
 gma-u.5   100813340   60S ribosomal protein L13a 
 gma-u.5   100499978   uncharacterized LOC100499978 
 vvi-u.5   100267451   60S ribosomal protein L13a-4-like 
 vvi-u.5   104880402   large ribosomal subunit protein uL13y-like 
 vvi-u.5   100261957   large ribosomal subunit protein uL13w 
 ppo-u.5   7461285   60S ribosomal protein L13a-4 
 ppo-u.5   7471141   60S ribosomal protein L13a-4 
 ppo-u.5   18095225   60S ribosomal protein L13a-2 
 mtr-u.5   11414560   60S ribosomal protein L13a-4 
 mtr-u.5   11429504   60S ribosomal protein L13a-4 
 mtr-u.5   25498414   60S ribosomal protein L13a-4 
 sly-u.5   101259442   large ribosomal subunit protein uL13w 
 sly-u.5   101261552   large ribosomal subunit protein uL13w 
 sly-u.5   101263197   large ribosomal subunit protein uL13w 
 osa-u.5   4342219   large ribosomal subunit protein uL13y 
 osa-u.5   4334154   large ribosomal subunit protein uL13w 
 zma-u.5   100191912   60S ribosomal protein L13a-like 
 zma-u.5   100283655   60S ribosomal protein L13a 

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Top 50 coexpressed genes to 107915460 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107915460 (ghi-r.1 coexpression data)

CoexMap"107915460"


ghiLOC107915460 | Entrez gene ID : 107915460    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 3 3 3 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0017148 [list] [network] negative regulation of translation  (69 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016700107.2 [sequence] [blastp]
XP_040958252.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_016700107.2)
cyto 6,  nucl 1,  vacu 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_040958252.1)
Subcellular
localization
TargetP
other 4  (predict for XP_016700107.2)
scret 9  (predict for XP_040958252.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107915460

.
ath-u.5
for
AT3G07110

.
ath-u.5
for
AT3G24830

.
ath-u.5
for
AT4G13170

.
gma-u.5
for
100808497

.
gma-u.5
for
100813340

.
gma-u.5
for
100499978

.
vvi-u.5
for
100267451

.
vvi-u.5
for
104880402

.
vvi-u.5
for
100261957

.
ppo-u.5
for
7461285

.
ppo-u.5
for
7471141

.
ppo-u.5
for
18095225

.
mtr-u.5
for
11414560

.
mtr-u.5
for
11429504

.
mtr-u.5
for
25498414

.
sly-u.5
for
101259442

.
sly-u.5
for
101261552

.
sly-u.5
for
101263197

.
osa-u.5
for
4342219

.
osa-u.5
for
4334154

.
zma-u.5
for
100191912

.
zma-u.5
for
100283655

.


Ortholog ID: 1423
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G13170 AT3G24830 LOC100499978 LOC100813340 LOC101263197 LOC101259442 LOC4334154 LOC4342219 LOC100283655 LOC100191912 LOC103860259 LOC103838022 LOC104880402 LOC100261957 LOC7471141 LOC18095225 LOC11414560 LOC25498414 LOC123188847 LOC606336 LOC123426360 LOC123452290 LOC107942921 LOC107955241 LOC106434833 LOC106428188 CHLRE_12g532550v5 LOC8067456 LOC8085922 LOC102586211 LOC102587601 LOC102616397 LOC102617059 LOC100846133 LOC100845636 LOC107824149 LOC107831576
Function* Ribosomal protein L13 family protein Ribosomal protein L13 family protein uncharacterized LOC100499978 60S ribosomal protein L13a large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w large ribosomal subunit protein uL13y 60S ribosomal protein L13a 60S ribosomal protein L13a-like 60S ribosomal protein L13a-2 60S ribosomal protein L13a-2 large ribosomal subunit protein uL13y-like large ribosomal subunit protein uL13w 60S ribosomal protein L13a-4 60S ribosomal protein L13a-2 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-1 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4-like 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-2 60S ribosomal protein L13a-4 ribosomal protein L13a 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00260 Glycine, serine and threonine metabolism 3
tae00261 Monobactam biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
tae00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826931 822081 100499978 100813340 101263197 101259442 4334154 4342219 100283655 100191912 103860259 103838022 104880402 100261957 7471141 18095225 11414560 25498414 123188847 606336 123426360 123452290 107942921 107955241 106434833 106428188 5718550 8067456 8085922 102586211 102587601 102616397 102617059 100846133 100845636 107824149 107831576
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