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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111198057   uncharacterized LOC111198057 
 bna-r.1   106388241   uncharacterized LOC106388241 
 bna-r.1   125608776   uncharacterized LOC125608776 
 bra-r.6   103869037   uncharacterized LOC103869037 
 ath-u.5   AT3G22430   RNA recognition motif XS domain protein 
 ghi-r.1   107891937   uncharacterized LOC107891937 
 ghi-r.1   107888885   uncharacterized LOC107888885 
 cit-r.1   102629231   hypothetical protein 
 gma-u.5   100805242   uncharacterized LOC100805242 
 gma-u.5   100779864   protein SUPPRESSOR OF GENE SILENCING 3 
 vvi-u.5   100259596   uncharacterized LOC100259596 
 ppo-u.5   7474208   uncharacterized LOC7474208 
 ppo-u.5   18101554   putative proline-rich receptor-like protein kinase PERK11 
 mtr-u.5   25485210   uncharacterized LOC25485210 
 sly-u.5   101252627   uncharacterized LOC101252627 
 sot-r.1   102579696   uncharacterized LOC102579696 
 nta-r.1   107791045   uncharacterized LOC107791045 
 nta-r.1   107784773   uncharacterized LOC107784773 
 osa-u.5   4331689   uncharacterized LOC4331689 
 zma-u.5   103644434   protein SUPPRESSOR OF GENE SILENCING 3 
 zma-u.5   100194318   XS domain containing protein expressed 
 tae-r.2   123093216   fibrous sheath CABYR-binding protein 
 tae-r.2   123084876   formin-like protein 7 
 tae-r.2   123098482   formin-like protein 7 
 hvu-r.1   123449495   early nodulin-75-like 
 sbi-r.1   8085456   uncharacterized LOC8085456 
 bdi-r.1   100841373   wiskott-Aldrich syndrome protein family member 2 

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Top 50 coexpressed genes to 111198057 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111198057 (bna-r.1 coexpression data)

CoexMap"111198057"


bnaLOC111198057 | Entrez gene ID : 111198057    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing  (145 genes)  IEA  
GO CC
GO MF
Protein XP_022550339.2 [sequence] [blastp]
XP_022550340.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_022550339.2)
chlo 6,  nucl 4  (predict for XP_022550340.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_022550339.2)
chlo 7  (predict for XP_022550340.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111198057
bna-r.1
for
106388241
bna-r.1
for
125608776
bra-r.6
for
103869037
ath-u.5
for
AT3G22430
ghi-r.1
for
107891937
ghi-r.1
for
107888885
cit-r.1
for
102629231
gma-u.5
for
100805242
gma-u.5
for
100779864
vvi-u.5
for
100259596
ppo-u.5
for
7474208
ppo-u.5
for
18101554
mtr-u.5
for
25485210
sly-u.5
for
101252627
sot-r.1
for
102579696
nta-r.1
for
107791045
nta-r.1
for
107784773
osa-u.5
for
4331689
zma-u.5
for
103644434
zma-u.5
for
100194318
tae-r.2
for
123093216
tae-r.2
for
123084876
tae-r.2
for
123098482
hvu-r.1
for
123449495
sbi-r.1
for
8085456
bdi-r.1
for
100841373


Ortholog ID: 8956
Species bna bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC111198057 LOC106388241 LOC125608776 LOC103869037 AT3G22430 LOC107891937 LOC107888885 LOC102629231 LOC100805242 LOC100779864 LOC100259596 LOC7474208 LOC18101554 LOC25485210 LOC101252627 LOC102579696 LOC107791045 LOC107784773 LOC4331689 LOC103644434 LOC100194318 LOC123093216 LOC123084876 LOC123098482 LOC123449495 LOC8085456 LOC100841373
Function* uncharacterized LOC111198057 uncharacterized LOC106388241 uncharacterized LOC125608776 uncharacterized LOC103869037 RNA recognition motif XS domain protein uncharacterized LOC107891937 uncharacterized LOC107888885 hypothetical protein uncharacterized LOC100805242 protein SUPPRESSOR OF GENE SILENCING 3 uncharacterized LOC100259596 uncharacterized LOC7474208 putative proline-rich receptor-like protein kinase PERK11 uncharacterized LOC25485210 uncharacterized LOC101252627 uncharacterized LOC102579696 uncharacterized LOC107791045 uncharacterized LOC107784773 uncharacterized LOC4331689 protein SUPPRESSOR OF GENE SILENCING 3 XS domain containing protein expressed fibrous sheath CABYR-binding protein formin-like protein 7 formin-like protein 7 early nodulin-75-like uncharacterized LOC8085456 wiskott-Aldrich syndrome protein family member 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03250 Viral life cycle - HIV-1 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111198057 106388241 125608776 103869037 821813 107891937 107888885 102629231 100805242 100779864 100259596 7474208 18101554 25485210 101252627 102579696 107791045 107784773 4331689 103644434 100194318 123093216 123084876 123098482 123449495 8085456 100841373
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