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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111198673   protein SUPPRESSOR OF GENE SILENCING 3 
 bna-r.1   106348321   protein SUPPRESSOR OF GENE SILENCING 3 
 bra-r.6   103874228   protein SUPPRESSOR OF GENE SILENCING 3 
 ath-u.5   SGS3   XS domain-containing protein / XS zinc finger domain-containing protein-like protein 
 ghi-r.1   107896872   protein SUPPRESSOR OF GENE SILENCING 3 
 ghi-r.1   107896873   protein SUPPRESSOR OF GENE SILENCING 3 
 ghi-r.1   107914420   protein SUPPRESSOR OF GENE SILENCING 3 
 cit-r.1   102610323   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-u.5   100807738   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-u.5   100792019   protein SUPPRESSOR OF GENE SILENCING 3 
 gma-u.5   100804352   protein SUPPRESSOR OF GENE SILENCING 3 
 vvi-u.5   100245878   protein SUPPRESSOR OF GENE SILENCING 3 
 ppo-u.5   112325062   protein SUPPRESSOR OF GENE SILENCING 3 
 ppo-u.5   7484099   protein SUPPRESSOR OF GENE SILENCING 3-like 
 mtr-u.5   11435052   protein SUPPRESSOR OF GENE SILENCING 3 
 mtr-u.5   11419957   protein SUPPRESSOR OF GENE SILENCING 3 
 sly-u.5   SGS3   SGS3-like protein 
 sot-r.1   102603754   protein SUPPRESSOR OF GENE SILENCING 3 
 nta-r.1   107800768   protein SUPPRESSOR OF GENE SILENCING 3-like 
 nta-r.1   107764764   protein SUPPRESSOR OF GENE SILENCING 3-like 
 osa-u.5   4351726   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 osa-u.5   4351724   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 zma-u.5   103650615   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 zma-u.5   100037819   ragged seedling 1 
 tae-r.2   123165216   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 tae-r.2   123150683   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 tae-r.2   123110995   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 hvu-r.1   123398315   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 sbi-r.1   8082808   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 sbi-r.1   8082807   protein SUPPRESSOR OF GENE SILENCING 3 homolog 
 bdi-r.1   100838532   protein SUPPRESSOR OF GENE SILENCING 3 homolog 

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Top 50 coexpressed genes to 111198673 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111198673 (bna-r.1 coexpression data)

CoexMap"111198673"


bnaLOC111198673 | Entrez gene ID : 111198673    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 3 1 2 2 1 1 2 2 2 3 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051607 [list] [network] defense response to virus  (3 genes)  IEA  
GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing  (145 genes)  IEA  
GO CC
GO MF
Protein XP_048591013.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  E.R. 1  (predict for XP_048591013.1)
Subcellular
localization
TargetP
other 9  (predict for XP_048591013.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111198673
bna-r.1
for
106348321
bra-r.6
for
103874228
ath-u.5
for
SGS3
ghi-r.1
for
107896872
ghi-r.1
for
107896873
ghi-r.1
for
107914420
cit-r.1
for
102610323
gma-u.5
for
100807738
gma-u.5
for
100792019
gma-u.5
for
100804352
vvi-u.5
for
100245878
ppo-u.5
for
112325062
ppo-u.5
for
7484099
mtr-u.5
for
11435052
mtr-u.5
for
11419957
sly-u.5
for
SGS3
sot-r.1
for
102603754
nta-r.1
for
107800768
nta-r.1
for
107764764
osa-u.5
for
4351726
osa-u.5
for
4351724
zma-u.5
for
103650615
zma-u.5
for
100037819
tae-r.2
for
123165216
tae-r.2
for
123150683
tae-r.2
for
123110995
hvu-r.1
for
123398315
sbi-r.1
for
8082808
sbi-r.1
for
8082807
bdi-r.1
for
100838532


Ortholog ID: 5177
Species bna bna bra ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC111198673 LOC106348321 LOC103874228 SGS3 LOC107896872 LOC107896873 LOC107958685 LOC102610323 LOC100807738 LOC100792019 LOC100804352 LOC100245878 LOC112325062 LOC7484099 LOC11435052 LOC11419957 SGS3 LOC102603754 LOC107800768 LOC107764764 LOC4351726 LOC4351724 LOC103650615 LOC100037819 LOC123165216 LOC123110995 LOC123088654 LOC123398315 LOC8082808 LOC8082807 LOC100838532
Function* protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 XS domain-containing protein / XS zinc finger domain-containing protein-like protein protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3-like protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3 SGS3-like protein protein SUPPRESSOR OF GENE SILENCING 3 protein SUPPRESSOR OF GENE SILENCING 3-like protein SUPPRESSOR OF GENE SILENCING 3-like protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog ragged seedling 1 protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog protein SUPPRESSOR OF GENE SILENCING 3 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03083 Polycomb repressive complex 3
zma03082 ATP-dependent chromatin remodeling 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
bdi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111198673 106348321 103874228 832422 107896872 107896873 107958685 102610323 100807738 100792019 100804352 100245878 112325062 7484099 11435052 11419957 100134882 102603754 107800768 107764764 4351726 4351724 103650615 100037819 123165216 123110995 123088654 123398315 8082808 8082807 100838532
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