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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11419509   putative RING-H2 finger protein ATL53 
 mtr-r.5   11419509   putative RING-H2 finger protein ATL53 
 mtr-m.5   11419509   putative RING-H2 finger protein ATL53 
 mtr-u.5   11429516   RING-H2 finger protein ATL52 
 gma-u.5   100809014   RING-H2 finger protein ATL52 
 ppo-u.5   18094156   E3 ubiquitin-protein ligase Os04g0590900 
 ppo-u.5   7493878   RING-H2 finger protein ATL52 
 ath-u.5   AT3G03550   RING/U-box superfamily protein 
 ath-u.5   AT5G17600   RING/U-box superfamily protein 
 bra-r.6   103859002   RING-H2 finger protein ATL51-like 
 bra-r.6   103844257   RING-H2 finger protein ATL51 
 bra-r.6   103856257   RING-H2 finger protein ATL52 
 vvi-u.5   100243705   E3 ubiquitin-protein ligase Os04g0590900 
 vvi-u.5   100260525   RING-H2 finger protein ATL51 
 ghi-r.1   107924365   E3 ubiquitin-protein ligase Os04g0590900 
 ghi-r.1   107893108   RING-H2 finger protein ATL52 
 ghi-r.1   107937758   RING-H2 finger protein ATL52 
 bna-r.1   125584123   RING-H2 finger protein ATL52-like 
 bna-r.1   106386510   RING-H2 finger protein ATL52 
 bna-r.1   106387303   RING-H2 finger protein ATL51 
 cit-r.1   102624382   E3 ubiquitin-protein ligase Os04g0590900-like 
 cit-r.1   102614079   RING-H2 finger protein ATL52-like 
 sly-u.5   101265935   RING-H2 finger protein ATL51-like 
 sly-u.5   101260465   RING-H2 finger protein ATL52 
 sly-u.5   101255238   RING-H2 finger protein ATL51 
 sot-r.1   102590413   RING-H2 finger protein ATL51-like 
 sot-r.1   102600372   RING-H2 finger protein ATL52-like 
 sot-r.1   102598642   RING-H2 finger protein ATL51-like 
 nta-r.1   107815272   uncharacterized LOC107815272 
 nta-r.1   107782602   RING-H2 finger protein ATL52-like 
 nta-r.1   107827464   RING-H2 finger protein ATL52-like 
 osa-u.5   4336823   E3 ubiquitin-protein ligase Os04g0590900-like 
 osa-u.5   4330383   E3 ubiquitin-protein ligase Os04g0590900-like 
 zma-u.5   103627577   E3 ubiquitin-protein ligase Os04g0590900 
 zma-u.5   100217100   uncharacterized LOC100217100 
 tae-r.2   123054505   E3 ubiquitin-protein ligase Os04g0590900 
 tae-r.2   123046632   E3 ubiquitin-protein ligase Os04g0590900 
 tae-r.2   123137832   E3 ubiquitin-protein ligase Os04g0590900 
 hvu-r.1   123401955   E3 ubiquitin-protein ligase Os04g0590900-like 
 hvu-r.1   123430852   E3 ubiquitin-protein ligase Os04g0590900-like 
 sbi-r.1   8073894   E3 ubiquitin-protein ligase Os04g0590900 
 sbi-r.1   8060470   E3 ubiquitin-protein ligase Os04g0590900 
 bdi-r.1   100835994   E3 ubiquitin-protein ligase Os04g0590900 
 bdi-r.1   100832041   E3 ubiquitin-protein ligase Os04g0590900 

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Top 50 coexpressed genes to 11419509 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11419509 (mtr-u.5 coexpression data)

CoexMap"11419509"


mtrLOC11419509 | Entrez gene ID : 11419509      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 2 3 2 3 3 2 3 3 3 2 2 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (329 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (3911 genes)  IEA  
Protein XP_003628792.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  vacu 2,  nucl 1,  chlo_mito 1  (predict for XP_003628792.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003628792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11419509
mtr-r.5
for
11419509
mtr-m.5
for
11419509
mtr-u.5
for
11429516
gma-u.5
for
100809014
ppo-u.5
for
18094156
ppo-u.5
for
7493878
ath-u.5
for
AT3G03550
ath-u.5
for
AT5G17600
bra-r.6
for
103859002
bra-r.6
for
103844257
bra-r.6
for
103856257
vvi-u.5
for
100243705
vvi-u.5
for
100260525
ghi-r.1
for
107924365
ghi-r.1
for
107893108
ghi-r.1
for
107937758
bna-r.1
for
125584123
bna-r.1
for
106386510
bna-r.1
for
106387303
cit-r.1
for
102624382
cit-r.1
for
102614079
sly-u.5
for
101265935
sly-u.5
for
101260465
sly-u.5
for
101255238
sot-r.1
for
102590413
sot-r.1
for
102600372
sot-r.1
for
102598642
nta-r.1
for
107815272
nta-r.1
for
107782602
nta-r.1
for
107827464
osa-u.5
for
4336823
osa-u.5
for
4330383
zma-u.5
for
103627577
zma-u.5
for
100217100
tae-r.2
for
123054505
tae-r.2
for
123046632
tae-r.2
for
123137832
hvu-r.1
for
123401955
hvu-r.1
for
123430852
sbi-r.1
for
8073894
sbi-r.1
for
8060470
bdi-r.1
for
100835994
bdi-r.1
for
100832041


Ortholog ID: 2409
Species mtr mtr gma gma ppo ppo ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC11419509 LOC11429516 LOC100809014 LOC102660020 LOC18094156 LOC7491862 AT3G03550 AT5G17600 LOC103859002 LOC103844257 LOC103856257 LOC100243705 LOC100260525 LOC107893108 LOC107946754 LOC107946836 LOC106386510 LOC106432871 LOC106443874 LOC102624382 LOC102614079 LOC101265935 LOC101260465 LOC101255238 LOC102590413 LOC102600372 LOC102598642 LOC107827464 LOC107785760 LOC107799393 LOC4336823 LOC4330383 LOC103627577 LOC100217100 LOC123054505 LOC123137832 LOC123190361 LOC123401955 LOC123430852 LOC8073894 LOC8060470 LOC100835994 LOC100832041
Function* putative RING-H2 finger protein ATL53 RING-H2 finger protein ATL52 RING-H2 finger protein ATL52 RING-H2 finger protein ATL52 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL51-like RING-H2 finger protein ATL51 RING-H2 finger protein ATL52 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL51 RING-H2 finger protein ATL52 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL52 RING-H2 finger protein ATL51 RING-H2 finger protein ATL51-like E3 ubiquitin-protein ligase Os04g0590900-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL51-like RING-H2 finger protein ATL52 RING-H2 finger protein ATL51 RING-H2 finger protein ATL51-like RING-H2 finger protein ATL52-like RING-H2 finger protein ATL51-like RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase Os04g0590900-like RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900 uncharacterized LOC100217100 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
bra04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bna01230 Biosynthesis of amino acids 7
bna00940 Phenylpropanoid biosynthesis 2
bna00941 Flavonoid biosynthesis 2
bna00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01212 Fatty acid metabolism 2
cit00062 Fatty acid elongation 2
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi00670 One carbon pool by folate 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11419509 11429516 100809014 102660020 18094156 7491862 821237 831626 103859002 103844257 103856257 100243705 100260525 107893108 107946754 107946836 106386510 106432871 106443874 102624382 102614079 101265935 101260465 101255238 102590413 102600372 102598642 107827464 107785760 107799393 4336823 4330383 103627577 100217100 123054505 123137832 123190361 123401955 123430852 8073894 8060470 100835994 100832041
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