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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060470   E3 ubiquitin-protein ligase Os04g0590900 
 zma-u.5   103627577   E3 ubiquitin-protein ligase Os04g0590900 
 zma-u.5   100217100   uncharacterized LOC100217100 
 osa-u.5   4336823   E3 ubiquitin-protein ligase Os04g0590900-like 
 osa-u.5   4330383   E3 ubiquitin-protein ligase Os04g0590900-like 
 ath-u.5   AT3G03550   RING/U-box superfamily protein 
 ath-u.5   AT5G17600   RING/U-box superfamily protein 
 gma-u.5   100809014   RING-H2 finger protein ATL52 
 sly-u.5   101265935   RING-H2 finger protein ATL51-like 
 sly-u.5   101260465   RING-H2 finger protein ATL52 
 sly-u.5   101255238   RING-H2 finger protein ATL51 
 vvi-u.5   100260525   RING-H2 finger protein ATL51 
 vvi-u.5   100243705   E3 ubiquitin-protein ligase Os04g0590900 
 ppo-u.5   7493878   RING-H2 finger protein ATL52 
 ppo-u.5   7491862   E3 ubiquitin-protein ligase Os04g0590900 
 mtr-u.5   11419509   putative RING-H2 finger protein ATL53 
 mtr-u.5   11429516   RING-H2 finger protein ATL52 

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Top 50 coexpressed genes to 8060470 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060470 (sbi-r.1 coexpression data)

CoexMap"8060470"


sbiLOC8060470 | Entrez gene ID : 8060470      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 1 3 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (3521 genes)  IEA  
Protein XP_002448425.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  E.R. 2,  chlo 1,  vacu 1,  E.R._plas 1  (predict for XP_002448425.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002448425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060470

.
zma-u.5
for
103627577

.
zma-u.5
for
100217100

.
osa-u.5
for
4336823

.
osa-u.5
for
4330383

.
ath-u.5
for
AT3G03550

.
ath-u.5
for
AT5G17600

.
gma-u.5
for
100809014

.
sly-u.5
for
101265935

.
sly-u.5
for
101260465

.
sly-u.5
for
101255238

.
vvi-u.5
for
100260525

.
vvi-u.5
for
100243705

.
ppo-u.5
for
7493878

.
ppo-u.5
for
7491862

.
mtr-u.5
for
11419509

.
mtr-u.5
for
11429516

.


Ortholog ID: 2409
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G17600 AT3G03550 LOC100809014 LOC101265935 LOC101255238 LOC4330383 LOC4336823 LOC100217100 LOC103627577 LOC103859002 LOC103856257 LOC100260525 LOC100243705 LOC7491862 LOC11419509 LOC11429516 LOC123137832 LOC123190361 LOC123430852 LOC107946754 LOC107946836 LOC106386510 LOC106443874 LOC8060470 LOC8073894 LOC102600372 LOC102590413 LOC102614079 LOC102624382 LOC100832041 LOC100835994 LOC107827464 LOC107785760
Function* RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL52 RING-H2 finger protein ATL51-like RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900-like uncharacterized LOC100217100 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL51-like RING-H2 finger protein ATL52 RING-H2 finger protein ATL51 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 putative RING-H2 finger protein ATL53 RING-H2 finger protein ATL52 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL52 RING-H2 finger protein ATL51-like E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL52-like RING-H2 finger protein ATL51-like RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase Os04g0590900-like E3 ubiquitin-protein ligase Os04g0590900 E3 ubiquitin-protein ligase Os04g0590900 RING-H2 finger protein ATL52-like E3 ubiquitin-protein ligase Os04g0590900-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
bra04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bna01230 Biosynthesis of amino acids 7
bna00940 Phenylpropanoid biosynthesis 2
bna00941 Flavonoid biosynthesis 2
bna00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi00670 One carbon pool by folate 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01212 Fatty acid metabolism 2
cit00062 Fatty acid elongation 2
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831626 821237 100809014 101265935 101255238 4330383 4336823 100217100 103627577 103859002 103856257 100260525 100243705 7491862 11419509 11429516 123137832 123190361 123430852 107946754 107946836 106386510 106443874 8060470 8073894 102600372 102590413 102614079 102624382 100832041 100835994 107827464 107785760
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