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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4343078   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 zma-u.5   103632264   putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.5   100806973   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5   101265587   putative pentatricopeptide repeat-containing protein At3g23330 
 mtr-u.5   11431200   pentatricopeptide repeat-containing protein At3g12770 

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Top 50 coexpressed genes to 4343078 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4343078 (osa-u.5 coexpression data)

CoexMap"123038233"


taeLOC123038233 | Entrez gene ID : 123038233    
Species osa zma gma sly mtr tae hvu vvi cit bra ghi ppo sbi bdi ath nta bna cre sot
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (15494 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044318052.1 [sequence] [blastp]
XP_044318055.1 [sequence] [blastp]
XP_044318059.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_044318052.1)
chlo 4,  plas 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_044318055.1)
chlo 4,  plas 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_044318059.1)
Subcellular
localization
TargetP
chlo 3,  other 3  (predict for XP_044318052.1)
chlo 3,  other 3  (predict for XP_044318055.1)
chlo 3,  other 3  (predict for XP_044318059.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4343078
zma-u.5
for
103632264
gma-u.5
for
100806973
sly-u.5
for
101265587
mtr-u.5
for
11431200


Ortholog ID: 12998
Species tae hvu bdi osa zma sbi gma sly mtr sot nta nta
Symbol LOC123180457 LOC123424951 LOC100829752 LOC4343078 LOC103632264 LOC8059732 LOC100806973 LOC101265587 LOC11431200 LOC102579044 LOC107809387 LOC107806850
Function* putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g57430, chloroplastic putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g12770 putative pentatricopeptide repeat-containing protein At3g11460 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123180457 123424951 100829752 4343078 103632264 8059732 100806973 101265587 11431200 102579044 107809387 107806850
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