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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123086291   protein CHUP1, chloroplastic 
 tae-r.2   123096704   protein CHUP1, chloroplastic 
 tae-r.2   123091722   protein CHUP1, chloroplastic 
 hvu-r.1   123448125   protein CHUP1, chloroplastic-like 
 bdi-r.1   100841367   protein CHUP1, chloroplastic 
 zma-u.5   100273374   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sbi-r.1   8155620   protein CHUP1, chloroplastic 
 ath-u.5   AT1G48280   hydroxyproline-rich glycoprotein family protein 
 gma-u.5   100820135   protein CHUP1, chloroplastic 
 gma-u.5   100820086   uncharacterized LOC100820086 
 gma-u.5   100809254   protein CHUP1, chloroplastic 
 bra-r.6   103871479   protein CHUP1, chloroplastic 
 vvi-u.5   100256278   protein CHUP1, chloroplastic 
 ppo-u.5   7496486   protein CHUP1, chloroplastic 
 mtr-u.5   11421894   protein CHUP1, chloroplastic 
 ghi-r.1   107910512   protein CHUP1, chloroplastic 
 ghi-r.1   107951552   protein CHUP1, chloroplastic 
 bna-r.1   106346417   protein CHUP1, chloroplastic 
 bna-r.1   106353813   protein CHUP1, chloroplastic-like 
 cit-r.1   102609433   protein CHUP1, chloroplastic 

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Top 50 coexpressed genes to 123086291 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123086291 (tae-r.2 coexpression data)

CoexMap"123086291"


taeLOC123086291 | Entrez gene ID : 123086291    
Species tae hvu bdi zma sbi ath gma bra vvi ppo mtr ghi bna cit sot sly nta osa cre
Paralog 3 1 1 1 1 1 3 1 1 1 1 2 2 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072699 [list] [network] protein localization to cortical microtubule cytoskeleton  (22 genes)  IEA  
GO CC
GO:0055028 [list] [network] cortical microtubule  (59 genes)  IEA  
GO MF
Protein XP_044363969.1 [sequence] [blastp]
XP_044363970.1 [sequence] [blastp]
XP_044363971.1 [sequence] [blastp]
XP_044363972.1 [sequence] [blastp]
XP_044363973.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044363969.1)
chlo 9  (predict for XP_044363970.1)
chlo 9  (predict for XP_044363971.1)
chlo 9  (predict for XP_044363972.1)
chlo 9  (predict for XP_044363973.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044363969.1)
chlo 8  (predict for XP_044363970.1)
chlo 8  (predict for XP_044363971.1)
chlo 8  (predict for XP_044363972.1)
chlo 8  (predict for XP_044363973.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123086291
tae-r.2
for
123096704
tae-r.2
for
123091722
hvu-r.1
for
123448125
bdi-r.1
for
100841367
zma-u.5
for
100273374
sbi-r.1
for
8155620
ath-u.5
for
AT1G48280
gma-u.5
for
100820135
gma-u.5
for
100820086
gma-u.5
for
100809254
bra-r.6
for
103871479
vvi-u.5
for
100256278
ppo-u.5
for
7496486
mtr-u.5
for
11421894
ghi-r.1
for
107910512
ghi-r.1
for
107951552
bna-r.1
for
106346417
bna-r.1
for
106353813
cit-r.1
for
102609433


Ortholog ID: 12039
Species tae tae tae hvu bdi zma sbi ath gma gma gma bra vvi ppo mtr ghi ghi bna bna cit
Symbol LOC123086291 LOC123096704 LOC123091722 LOC123448125 LOC100841367 LOC100273374 LOC8155620 AT1G48280 LOC100820135 LOC100820086 LOC100809254 LOC103871479 LOC100256278 LOC7496486 LOC11421894 LOC107910512 LOC107951552 LOC106346417 LOC106353813 LOC102609433
Function* protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein protein CHUP1, chloroplastic hydroxyproline-rich glycoprotein family protein protein CHUP1, chloroplastic uncharacterized LOC100820086 protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123086291 123096704 123091722 123448125 100841367 100273374 8155620 841248 100820135 100820086 100809254 103871479 100256278 7496486 11421894 107910512 107951552 106346417 106353813 102609433
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